D. rerio Gene: cox17 - ENSDARG00000069920 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069920
Namecox17
DescriptionCOX17 cytochrome c oxidase copper chaperone [Source:ZFIN;Acc:ZDB-GENE-040912-91]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103765, zgc:191605
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
85.0
  • 85.0
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
94.0
  • 94.0
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
184
  • 184
  • 1.28e3
  • 1.47e3
  • 1.85e3
  • 1.89e3
  • 2.78e3
  • 3.12e3
  • 4.17e3
  • 5.39e3
  • 5.58e3
  • 6.15e3
  • 6.24e3
  • 7.09e3
  • 7.54e3
  • 1.21e4
  • 1.32e4
99.39
  • 99.39
  • 95.73
  • 95.09
  • 93.80
  • 93.68
  • 90.70
  • 89.57
  • 86.04
  • 81.94
  • 81.33
  • 79.42
  • 79.10
  • 76.27
  • 74.75
  • 59.36
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
189
  • 189
  • 263
  • 276
  • 904
  • 3.69e3
99.37
  • 99.37
  • 99.12
  • 99.08
  • 96.98
  • 87.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
264
  • 264
99.12
  • 99.12
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
397
  • 397
  • 1.40e3
98.67
  • 98.67
  • 95.33
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
518
  • 518
  • 805
98.27
  • 98.27
  • 97.31
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
530
  • 530
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
545
  • 545
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
556
  • 556
98.14
  • 98.14
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
580
  • 580
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
581
  • 581
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
595
  • 595
98.01
  • 98.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
597
  • 597
98.00
  • 98.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
637
  • 637
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
653
  • 653
  • 840
  • 902
  • 1.25e3
  • 2.52e3
  • 2.95e3
  • 3.89e3
  • 4.72e3
  • 5.50e3
  • 5.58e3
97.82
  • 97.82
  • 97.19
  • 96.98
  • 95.81
  • 91.55
  • 90.11
  • 86.96
  • 84.19
  • 81.59
  • 81.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
742
  • 742
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.13e3
  • 1.13e3
96.23
  • 96.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.15
  • 96.15
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.23e3
  • 1.23e3
  • 3.09e3
95.90
  • 95.90
  • 89.66
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.36e3
  • 1.36e3
  • 3.61e3
95.45
  • 95.45
  • 87.93
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.38
  • 94.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.34
  • 94.34
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
1.93e3
  • 1.93e3
  • 3.82e3
  • 5.81e3
  • 7.01e3
  • 7.05e3
  • 7.57e3
93.54
  • 93.54
  • 87.23
  • 80.55
  • 76.53
  • 76.38
  • 74.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.99e3
  • 1.99e3
  • 2.69e3
  • 2.76e3
93.32
  • 93.32
  • 90.98
  • 90.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.47
  • 90.47
AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
3.15e3
  • 3.15e3
  • 3.15e3
89.47
  • 89.47
  • 89.47
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.20e3
  • 3.20e3
  • 4.72e3
  • 4.98e3
  • 5.23e3
89.28
  • 89.28
  • 84.20
  • 83.33
  • 82.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.79e3
  • 3.79e3
  • 6.10e3
  • 6.29e3
  • 1.14e4
87.31
  • 87.31
  • 79.57
  • 78.93
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
4.98e3
  • 4.98e3
  • 5.50e3
  • 6.64e3
  • 6.72e3
  • 7.47e3
  • 8.22e3
  • 8.30e3
  • 8.30e3
83.33
  • 83.33
  • 81.57
  • 77.77
  • 77.49
  • 74.99
  • 72.48
  • 72.21
  • 72.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.11e3
  • 5.11e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
5.52e3
  • 5.52e3
  • 1.29e4
81.53
  • 81.53
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.63e3
  • 5.63e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.55e3
  • 6.55e3
78.06
  • 78.06
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
76.46
  • 76.46
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.07e4
  • 1.07e4
  • 1.12e4
66.66
  • 66.66
  • 66.66
  • 64.27
  • 64.27
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi14 species14 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSDARG00000069920.

Cross-references

EnsemblENSDARG00000069920 (cox17)
ZFINZDB-GENE-040912-91 (cox17)
EMBLBC081527, BC164430, BX511129
Uniprot/SPTREMBLQ66I53, Q66I53_DANRE

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