D. rerio Gene: samd12 - ENSDARG00000069973 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000069973
Namesamd12
Descriptionsterile alpha motif domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060503-192]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-121h11.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
526
  • 526
  • 8.39e3
  • 1.10e4
98.24
  • 98.24
  • 71.92
  • 63.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.54e3
  • 2.54e3
91.51
  • 91.51
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.38e3
  • 4.38e3
85.32
  • 85.32
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
8.58e3
  • 8.58e3
  • 9.61e3
  • 1.14e4
  • 1.17e4
  • 1.31e4
  • 1.49e4
  • 1.50e4
  • 1.53e4
  • 1.70e4
  • 1.82e4
71.26
  • 71.26
  • 67.82
  • 61.85
  • 60.94
  • 56.00
  • 50.05
  • 49.74
  • 48.78
  • 43.18
  • 39.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.33e3
  • 9.33e3
  • 1.32e4
68.77
  • 68.77
  • 55.87
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
  • 1.18e4
65.45
  • 65.45
  • 60.66
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.10e4
  • 1.10e4
  • 1.15e4
63.10
  • 63.10
  • 61.37
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • ZFS:0000040Larval:Days 14-20
1.17e4
  • 1.17e4
  • 1.22e4
  • 1.25e4
  • 1.26e4
  • 1.30e4
  • 1.36e4
  • 1.38e4
  • 1.44e4
  • 1.44e4
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.51e4
60.83
  • 60.83
  • 59.30
  • 58.07
  • 57.81
  • 56.41
  • 54.50
  • 53.77
  • 51.83
  • 51.78
  • 50.34
  • 50.26
  • 50.22
  • 49.92
  • 49.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.20e4
  • 1.20e4
  • 1.30e4
  • 1.52e4
59.88
  • 59.88
  • 56.50
  • 49.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.22e4
  • 1.22e4
  • 1.38e4
59.18
  • 59.18
  • 53.72
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e4
  • 1.22e4
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.07
  • 55.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.39e4
  • 1.39e4
  • 1.47e4
  • 1.59e4
  • 1.75e4
53.39
  • 53.39
  • 50.65
  • 46.88
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.11
  • 49.11
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.89
  • 46.89
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.26
  • 44.26
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.98
  • 38.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.88e4
  • 1.88e4
  • 2.00e4
37.09
  • 37.09
  • 33.12
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.04
  • 37.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.68
  • 31.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.14
  • 25.14
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.74
  • 23.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000069973 (samd12)
ZFINZDB-GENE-060503-192 (samd12)

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