D. rerio Gene: txnipb - ENSDARG00000070000 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070000
Nametxnipb
Descriptionthioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
OrganismDanio rerio (zebrafish)
Synonym(s)txnipl
Orthologs(s)6 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
92.66
  • 92.66
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
3.09e3
  • 3.09e3
  • 7.87e3
  • 9.84e3
  • 1.06e4
  • 1.07e4
  • 1.10e4
  • 1.23e4
  • 1.34e4
  • 1.40e4
  • 1.41e4
89.65
  • 89.65
  • 73.65
  • 67.06
  • 64.62
  • 64.28
  • 63.01
  • 58.79
  • 55.04
  • 53.14
  • 52.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.73e3
  • 4.73e3
  • 6.98e3
  • 8.81e3
84.17
  • 84.17
  • 76.65
  • 70.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.11
  • 81.11
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.08e3
  • 7.08e3
  • 1.71e4
76.29
  • 76.29
  • 42.64
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.81e3
  • 7.81e3
73.84
  • 73.84
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
8.43e3
  • 8.43e3
  • 1.07e4
  • 1.11e4
  • 1.14e4
  • 1.26e4
  • 1.28e4
  • 1.31e4
  • 1.47e4
  • 1.49e4
  • 1.60e4
71.77
  • 71.77
  • 64.32
  • 62.97
  • 61.74
  • 57.65
  • 57.25
  • 56.17
  • 50.68
  • 50.10
  • 46.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.37e3
  • 9.37e3
  • 1.54e4
68.63
  • 68.63
  • 48.47
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.50
  • 60.50
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.27e4
  • 1.27e4
57.45
  • 57.45
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.27e4
  • 1.27e4
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
  • 2.29e4
56.60
  • 56.60
  • 23.25
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.40
  • 56.40
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.23
  • 53.23
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.47e4
  • 1.47e4
50.72
  • 50.72
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.41
  • 43.41
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
  • 1.97e4
41.75
  • 41.75
  • 34.03
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.84e4
  • 1.84e4
38.35
  • 38.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.67
  • 35.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria6 species6 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070000.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000070000.

Cross-references

EnsemblENSDARG00000070000 (txnipb)
ZFINZDB-GENE-040917-1 (txnipb)
EMBLCR854827
Uniprot/SPTREMBLE7F1B2, E7F1B2_DANRE, X1WCU4, X1WCU4_DANRE

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