D. rerio Gene: rbp2a - ENSDARG00000070038 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070038
Namerbp2a
Descriptionretinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
OrganismDanio rerio (zebrafish)
Synonym(s)crbp, crbpii, rbp2, wu:fb69e02
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
43.0
  • 43.0
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
71.4
  • 71.4
99.76
  • 99.76
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
228
  • 228
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
277
  • 277
99.08
  • 99.08
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
292
  • 292
  • 355
  • 473
  • 532
  • 3.00e3
  • 6.48e3
  • 7.35e3
  • 1.03e4
  • 1.18e4
  • 1.27e4
  • 1.40e4
  • 1.41e4
99.03
  • 99.03
  • 98.81
  • 98.42
  • 98.22
  • 89.96
  • 78.29
  • 75.37
  • 65.61
  • 60.40
  • 57.40
  • 53.20
  • 52.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
293
  • 293
  • 3.01e3
  • 4.31e3
  • 5.89e3
  • 5.89e3
  • 7.62e3
  • 9.55e3
  • 1.11e4
  • 1.15e4
  • 1.16e4
99.02
  • 99.02
  • 89.93
  • 85.56
  • 80.28
  • 80.27
  • 74.50
  • 68.02
  • 62.94
  • 61.42
  • 61.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
424
  • 424
  • 1.11e3
  • 1.50e3
98.58
  • 98.58
  • 96.29
  • 94.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
523
  • 523
  • 733
98.25
  • 98.25
  • 97.55
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
781
  • 781
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.86
  • 95.86
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.52
  • 93.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.20e3
  • 2.20e3
  • 3.92e3
92.64
  • 92.64
  • 86.87
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.43
  • 91.43
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.40
  • 90.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.39e3
  • 3.39e3
88.65
  • 88.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.90e3
  • 3.90e3
  • 1.10e4
  • 1.17e4
  • 1.57e4
86.94
  • 86.94
  • 63.02
  • 60.84
  • 47.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001787photoreceptor layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.47e3
  • 7.47e3
  • 8.96e3
  • 9.33e3
75.00
  • 75.00
  • 69.99
  • 68.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
8.53e3
  • 8.53e3
  • 8.53e3
  • 1.12e4
71.43
  • 71.43
  • 71.43
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
  • 1.47e4
70.22
  • 70.22
  • 50.78
AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 1.09e4
  • 1.16e4
69.99
  • 69.99
  • 63.63
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
67.87
  • 67.87
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.30
  • 65.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.42e4
  • 1.42e4
  • 1.69e4
  • 1.75e4
52.40
  • 52.40
  • 43.58
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.91
  • 48.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.76
  • 47.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

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