D. rerio Gene: PLEKHS1 (1 to many) - ENSDARG00000070041 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070041
NamePLEKHS1 (1 to many)
Descriptionzgc:153920 [Source:ZFIN;Acc:ZDB-GENE-061013-702]
OrganismDanio rerio (zebrafish)
Synonym(s)ba211n11.2, c10orf81, flj23537
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
71.45
  • 71.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
55.38
  • 55.38
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.50e4
50.57
  • 50.57
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.61
  • 49.61
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.87
  • 45.87
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.67
  • 45.67
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.39e4
  • 2.39e4
20.08
  • 20.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Neopterygii2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070041.

Cross-references

EnsemblENSDARG00000070041 (PLEKHS1 (1 to many))
HGNCHGNC:26285 (PLEKHS1 (1 to many))
ZFINZDB-GENE-061013-702 (zgc:153920)
Uniprot/SPTREMBLF1R248, F1R248_DANRE

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