Gene: PLEKHS1 (1 to many) - ENSDARG00000070041 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000070041
Name	PLEKHS1 (1 to many)
Description	zgc:153920 [Source:ZFIN;Acc:ZDB-GENE-061013-702]
Organism	Danio rerio (zebrafish)
Synonym(s)	ba211n11.2, c10orf81, flj23537
Orthologs(s)	15 orthologs
Paralog(s)	2 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	8.53e3 8.53e3	71.45 71.45	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	9.12e3 9.12e3	69.46 69.46	AEIR AEIR
UBERON:0001997	olfactory epithelium	[+] 1 stage UBERON:0000104life cycle	1.33e4 1.33e4	55.38 55.38	AEIR AEIR
UBERON:0000080	mesonephros	[+] 2 stages UBERON:0000066fully formed stage UBERON:0000104life cycle	1.48e4 1.48e4 1.50e4	50.57 50.57 49.92	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.50e4 1.50e4	49.61 49.61	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.62e4 1.62e4	45.87 45.87	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.62e4 1.62e4	45.67 45.67	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage ZFS:0000037Larval:Day 5	2.39e4 2.39e4	20.08 20.08	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	15 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	15 genes ENSG00000148735 PLEKHS1 ENSMUSG00000035818 Plekhs1 ENSPTRG00000002953 PLEKHS1 ENSGGOG00000034884 PLEKHS1 ENSMMUG00000001218 PLEKHS1 ENSRNOG00000016926 Plekhs1 ENSBTAG00000011487 PLEKHS1 ENSECAG00000015436 PLEKHS1 ENSOCUG00000004915 PLEKHS1 ENSCAFG00000011169 PLEKHS1 ENSFCAG00000022100 PLEKHS1 ENSCPOG00000009201 PLEKHS1 ENSEEUG00000002893 PLEKHS1 ENSOANG00000001571 PLEKHS1 ENSGALG00000020679 PLEKHS1	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000070041.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	1 gene ENSDARG00000090526 PLEKHS1 (1 to many)	Compare expression	[+]
Neopterygii	2 genes ENSDARG00000079227 plekhs1 ENSDARG00000090526 PLEKHS1 (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000070041.

Cross-references

Ensembl	ENSDARG00000070041 (PLEKHS1 (1 to many))
HGNC	HGNC:26285 (PLEKHS1 (1 to many))
ZFIN	ZDB-GENE-061013-702 (zgc:153920)
Uniprot/SPTREMBL	F1R248, F1R248_DANRE