D. rerio Gene: celf4 - ENSDARG00000070045 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070045
Namecelf4
DescriptionCUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92761
Orthologs(s)15 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
  • 4.46e3
92.46
  • 92.46
  • 85.06
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
3.13e3
  • 3.13e3
  • 4.74e3
  • 5.98e3
  • 1.21e4
  • 1.28e4
  • 1.35e4
89.52
  • 89.52
  • 84.13
  • 79.99
  • 59.40
  • 57.16
  • 54.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
3.60e3
  • 3.60e3
  • 1.10e4
87.95
  • 87.95
  • 63.06
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.00e3
  • 4.00e3
  • 1.32e4
  • 1.41e4
86.60
  • 86.60
  • 55.88
  • 52.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
4.81e3
  • 4.81e3
  • 7.52e3
  • 8.05e3
  • 1.11e4
  • 1.26e4
  • 1.37e4
  • 1.44e4
  • 1.50e4
  • 1.55e4
83.90
  • 83.90
  • 74.82
  • 73.06
  • 62.83
  • 57.90
  • 54.10
  • 51.88
  • 49.81
  • 48.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
7.33e3
  • 7.33e3
  • 7.57e3
  • 8.36e3
75.47
  • 75.47
  • 74.64
  • 72.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.29e4
  • 1.29e4
56.86
  • 56.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.72e4
55.39
  • 55.39
  • 42.57
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.93
  • 48.93
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.53e4
  • 1.53e4
48.67
  • 48.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.30
  • 45.30
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.51
  • 37.51
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.82
  • 36.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.41
  • 32.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.49
  • 30.49
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.11
  • 25.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Bilateria4 genesCompare expression
Opisthokonta6 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070045.

Cross-references

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