D. rerio Gene: tdrd6 - ENSDARG00000070052 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070052
Nametdrd6
Descriptiontudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-30j22.9
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
350
  • 350
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
857
  • 857
  • 1.61e3
  • 2.29e3
  • 1.10e4
  • 1.33e4
97.13
  • 97.13
  • 94.60
  • 92.34
  • 63.17
  • 55.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.42
  • 96.42
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.12e3
  • 2.12e3
92.92
  • 92.92
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
3.27e3
  • 3.27e3
  • 1.07e4
  • 1.10e4
  • 1.13e4
  • 1.30e4
  • 1.60e4
  • 1.63e4
  • 1.66e4
  • 1.72e4
  • 1.77e4
89.07
  • 89.07
  • 64.11
  • 63.25
  • 62.32
  • 56.48
  • 46.54
  • 45.47
  • 44.28
  • 42.30
  • 40.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.93
  • 87.93
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.69e3
  • 3.69e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.94e3
  • 5.94e3
80.12
  • 80.12
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.71
  • 71.71
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.16
  • 71.16
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
9.91e3
  • 9.91e3
  • 1.11e4
  • 1.16e4
  • 1.19e4
  • 1.35e4
  • 1.45e4
66.82
  • 66.82
  • 62.77
  • 61.21
  • 59.99
  • 54.68
  • 51.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.56
  • 63.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.14
  • 60.14
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
56.18
  • 56.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.47e4
  • 1.47e4
50.66
  • 50.66
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
  • 1.72e4
50.59
  • 50.59
  • 42.42
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.75
  • 47.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
  • 1.94e4
  • 2.03e4
  • 2.06e4
  • 2.15e4
  • 2.27e4
40.40
  • 40.40
  • 35.02
  • 32.01
  • 30.88
  • 28.02
  • 23.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
  • 1.82e4
40.33
  • 40.33
  • 39.18
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.82e4
  • 1.82e4
  • 1.96e4
  • 2.12e4
39.04
  • 39.04
  • 34.52
  • 29.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.79
  • 37.79
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.92
  • 36.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.01e4
  • 2.01e4
  • 2.27e4
32.56
  • 32.56
  • 24.16
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.79
  • 28.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000070052.

Cross-references

EnsemblENSDARG00000070052 (tdrd6)
ZFINZDB-GENE-041001-210 (tdrd6)
EMBLBX510920
Uniprot/SPTREMBLF1R237, F1R237_DANRE, F1RE34, F1RE34_DANRE, U3JAH4, U3JAH4_DANRE

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