D. rerio Gene: si:ch211-262i1.5 - ENSDARG00000070059 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070059
Namesi:ch211-262i1.5
Descriptionsi:ch211-262i1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-3152]
OrganismDanio rerio (zebrafish)
Synonym(s)fc28f08, wu:fc28f08
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.14
  • 88.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.38e3
  • 5.38e3
81.98
  • 81.98
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.03e3
  • 6.03e3
  • 6.26e3
  • 6.72e3
  • 1.17e4
  • 1.27e4
79.81
  • 79.81
  • 79.05
  • 77.50
  • 60.80
  • 57.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.14e3
  • 6.14e3
79.43
  • 79.43
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
  • 6.46e3
  • 9.17e3
79.13
  • 79.13
  • 78.36
  • 69.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
7.31e3
  • 7.31e3
  • 9.44e3
  • 9.59e3
  • 9.93e3
  • 1.01e4
  • 1.25e4
75.53
  • 75.53
  • 68.39
  • 67.90
  • 66.75
  • 66.08
  • 58.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
7.73e3
  • 7.73e3
  • 8.77e3
  • 9.07e3
  • 9.23e3
  • 9.34e3
  • 9.38e3
  • 1.02e4
  • 1.08e4
  • 1.10e4
  • 1.14e4
  • 1.30e4
  • 1.36e4
  • 1.40e4
  • 1.41e4
74.13
  • 74.13
  • 70.65
  • 69.63
  • 69.10
  • 68.71
  • 68.60
  • 65.71
  • 63.96
  • 63.17
  • 61.80
  • 56.43
  • 54.39
  • 52.99
  • 52.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.75e3
  • 7.75e3
74.05
  • 74.05
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
8.53e3
  • 8.53e3
  • 9.09e3
  • 9.90e3
  • 9.98e3
  • 1.02e4
  • 1.06e4
  • 1.07e4
  • 1.10e4
  • 1.23e4
  • 1.61e4
71.42
  • 71.42
  • 69.55
  • 66.85
  • 66.60
  • 65.98
  • 64.38
  • 64.15
  • 63.18
  • 58.76
  • 46.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.82e3
  • 8.82e3
70.47
  • 70.47
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.37e3
  • 9.37e3
68.62
  • 68.62
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.55e3
  • 9.55e3
68.02
  • 68.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.62e3
  • 9.62e3
67.80
  • 67.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.44
  • 67.44
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.51
  • 66.51
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.71
  • 65.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.04
  • 65.04
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.10e4
  • 1.10e4
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
  • 1.32e4
63.11
  • 63.11
  • 55.78
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.74
  • 62.74
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.18e4
  • 1.18e4
  • 1.25e4
  • 1.40e4
60.38
  • 60.38
  • 58.28
  • 53.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 1.33e4
59.53
  • 59.53
  • 55.36
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.23
  • 59.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.67
  • 57.67
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.71e4
57.09
  • 57.09
  • 42.77
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.79
  • 56.79
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.62
  • 55.62
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.98
  • 54.98
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.38e4
  • 1.38e4
53.91
  • 53.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.88
  • 52.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.35
  • 46.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070059.

Cross-references

EnsemblENSDARG00000070059 (si:ch211-262i1.5)
ZFINZDB-GENE-030131-3152 (si:ch211-262i1.5)
EMBLCR847939
Uniprot/SPTREMBLE7EZT8, E7EZT8_DANRE

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