D. rerio Gene: ctc1 - ENSDARG00000070119 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070119
Namectc1
DescriptionCTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153125
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
  • 1.14e4
87.44
  • 87.44
  • 61.74
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.46
  • 79.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.41e3
  • 6.41e3
78.54
  • 78.54
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.59e3
  • 6.59e3
  • 1.06e4
77.95
  • 77.95
  • 64.48
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.65e3
  • 6.65e3
  • 6.83e3
  • 7.43e3
  • 1.09e4
  • 1.25e4
77.74
  • 77.74
  • 77.15
  • 75.11
  • 63.54
  • 58.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.82e3
  • 7.82e3
  • 1.20e4
73.82
  • 73.82
  • 59.80
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.65
  • 71.65
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
69.24
  • 69.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.85e3
  • 9.85e3
67.03
  • 67.03
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.74
  • 65.74
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.51e4
65.56
  • 65.56
  • 49.54
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.43
  • 65.43
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.81
  • 63.81
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.11e4
  • 1.11e4
  • 1.14e4
62.68
  • 62.68
  • 61.81
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.62
  • 62.62
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.05
  • 62.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.63
  • 59.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.87
  • 56.87
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.32e4
  • 1.32e4
55.66
  • 55.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.37
  • 42.37
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.88
  • 37.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000070119 (ctc1)
ZFINZDB-GENE-061103-271 (ctc1)
Uniprot/SPTREMBLF1R1D8, F1R1D8_DANRE

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