D. rerio Gene: cdk6 - ENSDARG00000070228 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070228
Namecdk6
Descriptioncyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-234f14.1
Orthologs(s)24 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.38
  • 84.38
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
7.09e3
  • 7.09e3
  • 1.13e4
  • 1.15e4
  • 1.16e4
  • 1.33e4
  • 1.37e4
  • 1.37e4
  • 1.53e4
  • 1.69e4
76.27
  • 76.27
  • 62.31
  • 61.43
  • 61.13
  • 55.39
  • 54.10
  • 54.02
  • 48.72
  • 43.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
  • 1.34e4
75.16
  • 75.16
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
8.82e3
  • 8.82e3
  • 1.16e4
  • 1.74e4
70.48
  • 70.48
  • 61.10
  • 41.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.21e3
  • 9.21e3
69.16
  • 69.16
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
9.31e3
  • 9.31e3
  • 1.01e4
  • 1.03e4
  • 1.05e4
  • 1.06e4
  • 1.06e4
  • 1.09e4
  • 1.10e4
  • 1.13e4
  • 1.30e4
  • 1.33e4
  • 1.37e4
  • 1.42e4
  • 1.47e4
  • 1.49e4
68.84
  • 68.84
  • 66.08
  • 65.39
  • 64.82
  • 64.35
  • 64.34
  • 63.49
  • 63.19
  • 62.25
  • 56.33
  • 55.60
  • 53.96
  • 52.47
  • 50.90
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
9.42e3
  • 9.42e3
  • 9.47e3
  • 1.38e4
68.47
  • 68.47
  • 68.30
  • 53.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
9.97e3
  • 9.97e3
  • 1.03e4
  • 1.26e4
  • 1.32e4
  • 1.60e4
  • 1.68e4
66.62
  • 66.62
  • 65.36
  • 57.80
  • 55.65
  • 46.52
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.01e4
  • 1.01e4
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.04
  • 62.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.38
  • 60.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.26
  • 58.26
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.26e4
  • 1.26e4
57.95
  • 57.95
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.69
  • 57.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.08
  • 56.08
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.17
  • 55.17
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.11
  • 55.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.44
  • 53.44
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
  • 1.66e4
51.29
  • 51.29
  • 44.42
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.93
  • 50.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.66
  • 50.66
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
  • 1.61e4
  • 1.63e4
49.45
  • 49.45
  • 46.17
  • 45.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.90
  • 48.90
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
  • 1.73e4
45.82
  • 45.82
  • 41.99
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.60
  • 45.60
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.67e4
  • 1.67e4
44.11
  • 44.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.61
  • 40.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070228.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070228.

Cross-references

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