D. rerio Gene: sft2d3 - ENSDARG00000070284 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070284
Namesft2d3
DescriptionSFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
2.57e3
  • 2.57e3
  • 4.12e3
  • 1.09e4
  • 1.10e4
  • 1.14e4
91.38
  • 91.38
  • 86.20
  • 63.40
  • 63.31
  • 61.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
2.68e3
  • 2.68e3
  • 4.55e3
  • 9.75e3
  • 1.03e4
  • 1.04e4
  • 1.28e4
91.03
  • 91.03
  • 84.76
  • 67.35
  • 65.61
  • 65.18
  • 57.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.94e3
  • 2.94e3
90.15
  • 90.15
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.79e3
  • 6.79e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
6.91e3
  • 6.91e3
  • 7.49e3
  • 1.13e4
  • 1.20e4
  • 1.31e4
  • 1.36e4
  • 1.37e4
  • 1.42e4
  • 1.48e4
  • 1.49e4
76.88
  • 76.88
  • 74.91
  • 62.01
  • 59.93
  • 56.27
  • 54.36
  • 54.00
  • 52.32
  • 50.29
  • 50.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
  • 9.50e3
75.26
  • 75.26
  • 68.19
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
  • 1.80e4
75.13
  • 75.13
  • 39.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.75e3
  • 7.75e3
74.05
  • 74.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
72.39
  • 72.39
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.99
  • 71.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.86
  • 71.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
69.70
  • 69.70
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.17
  • 69.17
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
9.63e3
  • 9.63e3
  • 9.99e3
  • 1.00e4
  • 1.05e4
  • 1.13e4
  • 1.16e4
  • 1.22e4
  • 1.28e4
  • 1.30e4
  • 1.31e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
  • 1.34e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
67.75
  • 67.75
  • 66.53
  • 66.40
  • 64.82
  • 62.08
  • 61.13
  • 59.13
  • 57.04
  • 56.39
  • 56.16
  • 55.58
  • 55.38
  • 55.29
  • 55.08
  • 50.61
  • 49.92
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.69e3
  • 9.69e3
  • 1.39e4
67.56
  • 67.56
  • 53.35
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.02e4
  • 1.02e4
65.80
  • 65.80
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.03e4
  • 1.03e4
  • 1.28e4
  • 1.65e4
65.50
  • 65.50
  • 56.98
  • 44.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.80
  • 64.80
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.34
  • 64.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.50e4
63.07
  • 63.07
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.77
  • 62.77
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
59.83
  • 59.83
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
55.40
  • 55.40
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.45e4
  • 1.65e4
52.74
  • 52.74
  • 51.42
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
  • 1.46e4
51.04
  • 51.04
  • 50.99
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000070284 (sft2d3)
ZFINZDB-GENE-070907-1 (sft2d3)
EMBLFP016178
Uniprot/SPTREMBLX1WFG3, X1WFG3_DANRE

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