Gene: HIST1H4E - ENSDARG00000070285 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000070285
Name	HIST1H4E
Description	si:ch211-113a14.21 [Source:ZFIN;Acc:ZDB-GENE-121214-197]
Organism	Danio rerio (zebrafish)
Synonym(s)	gb:am422106, h4, h4/j, h4fj, si:ch211-113a14.10,gn si:ch211-113a14.13,gn si:ch211-113a14.21,gn si:ch211-113a14.9,gn si:ch
Orthologs(s)	108 orthologs
Paralog(s)	32 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000019Gastrula:Shield	1.25e4 1.25e4	58.19 58.19	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.32e4 1.32e4	55.68 55.68	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.49e4 1.49e4	50.06 50.06	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage	1.50e4 1.50e4 2.63e4 2.77e4	49.91 49.91 11.90 7.41	AEIR AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.50e4 1.50e4	49.69 49.69	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.67e4 1.67e4	44.05 44.05	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	1.78e4 1.78e4 2.19e4	40.45 40.45 26.61	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	2.27e4 2.27e4 2.58e4	23.98 23.98 13.73	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.68e4 2.68e4	10.25 10.25	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	60 genes ENSG00000158406 HIST1H4H ENSG00000197061 HIST1H4C ENSG00000197238 HIST1H4J ENSG00000197837 HIST4H4 ENSG00000270276 HIST2H4B ENSG00000270882 HIST2H4A ENSG00000273542 HIST1H4K ENSG00000274618 HIST1H4F ENSG00000275126 HIST1H4L ENSG00000276180 HIST1H4I ENSG00000276966 HIST1H4E ENSG00000277157 HIST1H4D ENSG00000278637 HIST1H4A ENSG00000278705 HIST1H4B ENSMUSG00000060093 Hist1h4a ENSMUSG00000060639 Hist1h4i ENSMUSG00000060678 Hist1h4c ENSMUSG00000060981 Hist1h4h ENSMUSG00000061482 Hist1h4d ENSMUSG00000064288 Hist1h4k ENSMUSG00000067455 Hist1h4j ENSMUSG00000069266 Hist1h4b ENSMUSG00000069274 Hist1h4f ENSMUSG00000069305 Hist1h4n ENSMUSG00000069306 Hist1h4m ENSMUSG00000091405 Hist2h4 ENSMUSG00000096010 Hist4h4 ENSPTRG00000001238 ENSPTRG00000004722 HIST1H4D ENSGGOG00000025522 ENSMMUG00000001440 HIST1H4A ENSRNOG00000045840 LOC100912489 ENSBTAG00000030504 ENSBTAG00000032259 HIST1H4C ENSBTAG00000032790 ENSBTAG00000033030 ENSBTAG00000039213 ENSBTAG00000046096 ENSBTAG00000046275 ENSBTAG00000047288 ENSBTAG00000048065 HIST1H4A ENSECAG00000004150 HIST1H4D ENSOCUG00000017172 HIST1H4D ENSOCUG00000026452 ENSCAFG00000024275 ENSCAFG00000029066 ENSCAFG00000029451 ENSFCAG00000031347 HIST1H4J ENSCPOG00000024453 ENSCPOG00000025854 HIST2H4B ENSEEUG00000000633 ENSMODG00000003838 HIST1H4E ENSOANG00000011438 ENSGALG00000025786 HIST1H46 ENSACAG00000021103 ENSXETG00000027421 ENSXETG00000030133 HIST1H4C ENSXETG00000030211 ENSXETG00000032754 ENSXETG00000032853 hist1h4c	Compare expression	[+]
Bilateria	25 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	108 genes ENSG00000158406 HIST1H4H ENSG00000197061 HIST1H4C ENSG00000197238 HIST1H4J ENSG00000197837 HIST4H4 ENSG00000270276 HIST2H4B ENSG00000270882 HIST2H4A ENSG00000273542 HIST1H4K ENSG00000274618 HIST1H4F ENSG00000275126 HIST1H4L ENSG00000276180 HIST1H4I ENSG00000276966 HIST1H4E ENSG00000277157 HIST1H4D ENSG00000278637 HIST1H4A ENSG00000278705 HIST1H4B ENSMUSG00000060093 Hist1h4a ENSMUSG00000060639 Hist1h4i ENSMUSG00000060678 Hist1h4c ENSMUSG00000060981 Hist1h4h ENSMUSG00000061482 Hist1h4d ENSMUSG00000064288 Hist1h4k ENSMUSG00000067455 Hist1h4j ENSMUSG00000069266 Hist1h4b ENSMUSG00000069274 Hist1h4f ENSMUSG00000069305 Hist1h4n ENSMUSG00000069306 Hist1h4m ENSMUSG00000091405 Hist2h4 ENSMUSG00000096010 Hist4h4 FBgn0013981 His4r FBgn0051611 His4:CG31611 FBgn0053869 His4:CG33869 FBgn0053871 His4:CG33871 FBgn0053873 His4:CG33873 FBgn0053875 His4:CG33875 FBgn0053877 His4:CG33877 FBgn0053879 His4:CG33879 FBgn0053881 His4:CG33881 FBgn0053883 His4:CG33883 FBgn0053885 His4:CG33885 FBgn0053887 His4:CG33887 FBgn0053889 His4:CG33889 FBgn0053891 His4:CG33891 FBgn0053893 His4:CG33893 FBgn0053895 His4:CG33895 FBgn0053897 His4:CG33897 FBgn0053899 His4:CG33899 FBgn0053901 His4:CG33901 FBgn0053903 His4:CG33903 FBgn0053905 His4:CG33905 FBgn0053907 His4:CG33907 FBgn0053909 His4:CG33909 WBGene00001875 his-1 WBGene00001879 his-5 WBGene00001884 his-10 WBGene00001888 his-14 WBGene00001892 his-18 WBGene00001900 his-26 WBGene00001902 his-28 WBGene00001905 his-31 WBGene00001911 his-37 WBGene00001912 his-38 WBGene00001920 his-46 WBGene00001924 his-50 WBGene00001930 his-56 WBGene00001934 his-60 WBGene00001938 his-64 WBGene00001941 his-67 ENSPTRG00000001238 ENSPTRG00000004722 HIST1H4D ENSGGOG00000025522 ENSMMUG00000001440 HIST1H4A ENSRNOG00000045840 LOC100912489 ENSBTAG00000030504 ENSBTAG00000032259 HIST1H4C ENSBTAG00000032790 ENSBTAG00000033030 ENSBTAG00000039213 ENSBTAG00000046096 ENSBTAG00000046275 ENSBTAG00000047288 ENSBTAG00000048065 HIST1H4A ENSECAG00000004150 HIST1H4D ENSOCUG00000017172 HIST1H4D ENSOCUG00000026452 ENSCAFG00000024275 ENSCAFG00000029066 ENSCAFG00000029451 ENSFCAG00000031347 HIST1H4J ENSCPOG00000024453 ENSCPOG00000025854 HIST2H4B ENSEEUG00000000633 ENSMODG00000003838 HIST1H4E ENSOANG00000011438 ENSGALG00000025786 HIST1H46 ENSACAG00000021103 ENSXETG00000027421 ENSXETG00000030133 HIST1H4C ENSXETG00000030211 ENSXETG00000032754 ENSXETG00000032853 hist1h4c FBgn0094465 GF17447 FBgn0095995 GF18983 FBgn0099598 GF22604 FBgn0099854 GF22860 FBgn0133444 GI10680 FBgn0186379 GD14701 FBgn0190279 His4 FBgn0202637 GJ15444 FBgn0232081 His4	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000070285.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	31 genes ENSDARG00000061547 zgc:153409 ENSDARG00000075366 hist1h4l ENSDARG00000076930 si:dkey-261m9.9 ENSDARG00000086555 zgc:163040 ENSDARG00000086614 HIST1H4D (1 to many) ENSDARG00000087236 si:ch211-113a14.26 ENSDARG00000087472 si:ch211-113a14.13 ENSDARG00000087543 si:dkey-108k21.12 ENSDARG00000087670 si:dkey-108k21.28 ENSDARG00000088420 zgc:163040 ENSDARG00000089044 si:ch211-113a14.10 ENSDARG00000089684 HIST1H4D (1 to many) ENSDARG00000089737 si:dkey-108k21.23 ENSDARG00000089823 si:ch211-113a14.6 ENSDARG00000090149 si:dkey-108k21.18 ENSDARG00000090591 si:dkey-261m9.13 ENSDARG00000090941 si:ch73-36p18.4 ENSDARG00000091011 si:ch211-113a14.9 ENSDARG00000091446 si:dkey-261m9.17 ENSDARG00000097103 zgc:165555 ENSDARG00000099920 si:dkey-23a13.19 ENSDARG00000101114 zgc:163040 ENSDARG00000101249 si:dkey-23a13.15 ENSDARG00000105318 si:ch73-368j24.3 ENSDARG00000105352 si:dkey-23a13.7 ENSDARG00000105353 si:ch1073-35f11.1 ENSDARG00000105355 HIST1H4I ENSDARG00000105376 si:ch73-368j24.4 ENSDARG00000105382 HIST1H4A ENSDARG00000105409 si:ch1073-159d7.2 ENSDARG00000105482 HIST1H4J	Compare expression	[+]
Eukaryota	32 genes ENSDARG00000061547 zgc:153409 ENSDARG00000075366 hist1h4l ENSDARG00000076930 si:dkey-261m9.9 ENSDARG00000086555 zgc:163040 ENSDARG00000086614 HIST1H4D (1 to many) ENSDARG00000087236 si:ch211-113a14.26 ENSDARG00000087472 si:ch211-113a14.13 ENSDARG00000087543 si:dkey-108k21.12 ENSDARG00000087670 si:dkey-108k21.28 ENSDARG00000088420 zgc:163040 ENSDARG00000089044 si:ch211-113a14.10 ENSDARG00000089684 HIST1H4D (1 to many) ENSDARG00000089737 si:dkey-108k21.23 ENSDARG00000089823 si:ch211-113a14.6 ENSDARG00000090149 si:dkey-108k21.18 ENSDARG00000090591 si:dkey-261m9.13 ENSDARG00000090941 si:ch73-36p18.4 ENSDARG00000091011 si:ch211-113a14.9 ENSDARG00000091446 si:dkey-261m9.17 ENSDARG00000097103 zgc:165555 ENSDARG00000099920 si:dkey-23a13.19 ENSDARG00000101114 zgc:163040 ENSDARG00000101249 si:dkey-23a13.15 ENSDARG00000105318 si:ch73-368j24.3 ENSDARG00000105352 si:dkey-23a13.7 ENSDARG00000105353 si:ch1073-35f11.1 ENSDARG00000105355 HIST1H4I ENSDARG00000105376 si:ch73-368j24.4 ENSDARG00000105382 HIST1H4A ENSDARG00000105409 si:ch1073-159d7.2 ENSDARG00000105471 si:ch73-368j24.1 ENSDARG00000105482 HIST1H4J	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000070285.

Cross-references

Ensembl	ENSDARG00000070285 (HIST1H4E)
HGNC	HGNC:4790 (HIST1H4E)
ZFIN	ZDB-GENE-121214-197 (si:ch211-113a14.21)
EMBL	BC142859, BX323062, CABZ01036006, CR354435, CR388152, CR762436, CU302436, CU457819, CU459186, CU463030, FP236812, FP325123, FQ312024
Uniprot/SPTREMBL	A3KPR4, A3KPR4_DANRE