D. rerio Gene: si:ch211-113a14.19 - ENSDARG00000070286 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070286
Namesi:ch211-113a14.19
Descriptionsi:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
OrganismDanio rerio (zebrafish)
Orthologs(s)221 orthologs
Paralog(s)35 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.34e3
  • 9.34e3
68.73
  • 68.73
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.50e4
  • 1.50e4
  • 1.64e4
49.75
  • 49.75
  • 44.97
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.78e4
  • 1.78e4
  • 2.00e4
  • 2.54e4
  • 2.68e4
40.23
  • 40.23
  • 33.14
  • 15.04
  • 10.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.96e4
  • 1.96e4
34.41
  • 34.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.60
  • 32.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.19e4
  • 2.19e4
26.79
  • 26.79
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.21e4
  • 2.21e4
26.12
  • 26.12
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
2.21e4
  • 2.21e4
  • 2.26e4
25.90
  • 25.90
  • 24.38
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.50
  • 21.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.47e4
  • 2.47e4
17.14
  • 17.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.66e4
  • 2.66e4
10.89
  • 10.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species221 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070286.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi31 genesCompare expression
Eukaryota35 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070286.

Cross-references

EnsemblENSDARG00000070286 (si:ch211-113a14.19)
ZFINZDB-GENE-121214-198 (si:ch211-113a14.19)
EMBLCR354435, CR762436, FP236812
Uniprot/SPTREMBLE7EXD7, E7EXD7_DANRE

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