D. rerio Gene: HIST1H2BA (1 to many) - ENSDARG00000070289 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070289
NameHIST1H2BA (1 to many)
Descriptionsi:ch211-113a14.22 [Source:ZFIN;Acc:ZDB-GENE-121214-203]
OrganismDanio rerio (zebrafish)
Synonym(s)ba317e16.3, h2bfu, stbp, tsh2b
Orthologs(s)290 orthologs
Paralog(s)35 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
8.82e3
  • 8.82e3
  • 1.04e4
70.48
  • 70.48
  • 65.21
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.09e4
  • 1.09e4
63.56
  • 63.56
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.11e4
  • 1.11e4
  • 1.24e4
62.70
  • 62.70
  • 58.49
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.34
  • 57.34
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.47e4
  • 1.47e4
50.85
  • 50.85
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.99e4
50.13
  • 50.13
  • 33.47
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.04
  • 50.04
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.62e4
  • 1.62e4
  • 1.82e4
  • 2.36e4
  • 2.77e4
45.83
  • 45.83
  • 38.93
  • 21.07
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.02e4
  • 2.02e4
32.25
  • 32.25
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.30
  • 28.30
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.43e4
  • 2.43e4
18.70
  • 18.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species231 genesCompare expression
Bilateria25 species290 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070289.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi33 genesCompare expression
Chordata34 genesCompare expression
Eukaryota35 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070289.

Cross-references

EnsemblENSDARG00000070289 (HIST1H2BA (1 to many))
HGNCHGNC:18730 (HIST1H2BA (1 to many))
ZFINZDB-GENE-121214-203 (si:ch211-113a14.22)
EMBLCR354435, CU459186
Uniprot/SPTREMBLR4GE15, R4GE15_DANRE

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