Gene: cald1l2 - ENSDARG00000070314 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000070314
Name	cald1l2
Description	caldesmon 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-120709-108]
Organism	Danio rerio (zebrafish)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	212 212	99.29 99.29	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	977 977 1.01e4	96.73 96.73 66.12	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	987 987	96.70 96.70	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.01e3 2.01e3	93.27 93.27	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.16e3 2.16e3	92.76 92.76	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5	2.81e3 2.81e3 3.86e3 6.44e3 9.42e3 9.66e3	90.59 90.59 87.08 78.43 68.47 67.65	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	3.03e3 3.03e3 3.82e3	89.85 89.85 87.22	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.61e3 3.61e3	87.92 87.92	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	4.14e3 4.14e3	86.15 86.15	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	4.77e3 4.77e3 5.42e3	84.03 84.03 81.86	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	4.98e3 4.98e3	83.32 83.32	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	5.81e3 5.81e3	80.55 80.55	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	6.50e3 6.50e3	78.24 78.24	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	7.93e3 7.93e3	73.44 73.44	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	8.06e3 8.06e3	73.00 73.00	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	8.64e3 8.64e3	71.07 71.07	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	9.35e3 9.35e3	68.68 68.68	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	9.64e3 9.64e3	67.71 67.71	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.09e4 1.09e4	63.58 63.58	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.31e4 1.31e4	56.20 56.20	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	1.40e4 1.40e4 1.46e4	53.10 53.10 50.95	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.48e4 1.48e4	50.37 50.37	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 2 stages ZFS:0000049segmentation UBERON:0000066fully formed stage	1.49e4 1.49e4 1.50e4	49.95 49.95 49.81	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	1.59e4 1.59e4 1.59e4	46.90 46.90 46.84	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Cross-references

Ensembl	ENSDARG00000070314 (cald1l2)
ZFIN	ZDB-GENE-120709-108 (cald1l2)