D. rerio Gene: zgc:162816 - ENSDARG00000070416 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070416
Namezgc:162816
Descriptionzgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
OrganismDanio rerio (zebrafish)
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.46
  • 92.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.25
  • 91.25
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.86e3
  • 2.86e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.72
  • 89.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
4.57e3
  • 4.57e3
  • 6.30e3
  • 7.57e3
  • 7.94e3
  • 8.43e3
84.71
  • 84.71
  • 78.91
  • 74.65
  • 73.42
  • 71.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.36
  • 80.36
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.58e3
  • 6.58e3
77.97
  • 77.97
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.68
  • 76.68
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
7.18e3
  • 7.18e3
  • 7.33e3
  • 8.59e3
  • 9.21e3
  • 9.44e3
  • 9.62e3
  • 1.01e4
  • 1.07e4
  • 1.35e4
  • 1.37e4
75.97
  • 75.97
  • 75.45
  • 71.24
  • 69.17
  • 68.39
  • 67.79
  • 66.26
  • 64.34
  • 54.66
  • 54.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
7.22e3
  • 7.22e3
  • 1.03e4
  • 1.12e4
  • 1.16e4
  • 1.17e4
  • 1.21e4
  • 1.24e4
  • 1.25e4
  • 1.27e4
  • 1.29e4
  • 1.32e4
  • 1.34e4
  • 1.39e4
  • 1.43e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
75.83
  • 75.83
  • 65.46
  • 62.37
  • 61.01
  • 60.96
  • 59.39
  • 58.53
  • 58.15
  • 57.39
  • 56.86
  • 55.77
  • 55.00
  • 53.47
  • 51.99
  • 50.61
  • 50.01
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
8.09e3
  • 8.09e3
  • 9.31e3
  • 9.98e3
  • 1.20e4
  • 1.23e4
  • 1.32e4
72.92
  • 72.92
  • 68.82
  • 66.58
  • 59.71
  • 58.96
  • 55.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
  • 1.16e4
71.70
  • 71.70
  • 61.02
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.60e3
  • 8.60e3
71.22
  • 71.22
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.87e3
  • 8.87e3
70.30
  • 70.30
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.98e3
  • 8.98e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.11e3
  • 9.11e3
69.51
  • 69.51
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
  • 1.21e4
  • 1.65e4
68.91
  • 68.91
  • 59.32
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.30e3
  • 9.30e3
  • 1.08e4
  • 1.33e4
68.87
  • 68.87
  • 63.78
  • 55.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.31e3
  • 9.31e3
68.82
  • 68.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.60
  • 65.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.63
  • 63.63
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.88
  • 62.88
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.44e4
62.62
  • 62.62
  • 51.85
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.79
  • 57.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.94
  • 56.94
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
  • 1.48e4
52.29
  • 52.29
  • 50.32
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
  • 1.81e4
50.63
  • 50.63
  • 39.44
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.26
  • 50.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.52
  • 49.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000070416.

Cross-references

EnsemblENSDARG00000070416 (zgc:162816)
ZFINZDB-GENE-070410-94 (zgc:162816)
Uniprot/SPTREMBLF1QCH7, F1QCH7_DANRE

Do not show this banner again