D. rerio Gene: chtopb - ENSDARG00000070430 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070430
Namechtopb
Descriptionchromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153909

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.08e3
  • 1.08e3
  • 1.50e4
96.37
  • 96.37
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.58e3
  • 3.58e3
  • 4.84e3
88.03
  • 88.03
  • 83.81
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.47e3
  • 4.47e3
  • 1.47e4
85.03
  • 85.03
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.34e3
  • 7.34e3
75.44
  • 75.44
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.04e3
  • 8.04e3
73.10
  • 73.10
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.43
  • 69.43
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
9.23e3
  • 9.23e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.62
  • 64.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.59
  • 63.59
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e4
  • 1.70e4
42.92
  • 42.92
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.93
  • 40.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.36
  • 38.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.92e4
  • 1.92e4
  • 1.97e4
  • 2.01e4
  • 2.11e4
  • 2.26e4
35.69
  • 35.69
  • 34.19
  • 32.74
  • 29.34
  • 24.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.98e4
  • 1.98e4
  • 2.18e4
33.63
  • 33.63
  • 26.84
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.23
  • 24.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000070430 (chtopb)
ZFINZDB-GENE-061013-712 (chtopb)
EMBLCR854916
Uniprot/SPTREMBLF1R6S8, F1R6S8_DANRE

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