D. rerio Gene: rpl22 - ENSDARG00000070437 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070437
Namerpl22
Descriptionribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:123327
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
61.0
  • 61.0
  • 150
99.80
  • 99.80
  • 99.50
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
69.7
  • 69.7
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
83.9
  • 83.9
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
86.7
  • 86.7
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
87.0
  • 87.0
  • 107
  • 108
  • 117
  • 138
  • 164
  • 166
  • 178
  • 183
  • 251
99.71
  • 99.71
  • 99.65
  • 99.64
  • 99.61
  • 99.54
  • 99.45
  • 99.45
  • 99.41
  • 99.39
  • 99.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
91.0
  • 91.0
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
91.3
  • 91.3
  • 101
  • 103
  • 106
  • 120
  • 144
  • 146
  • 160
  • 178
  • 196
  • 282
  • 300
  • 548
  • 3.90e3
99.70
  • 99.70
  • 99.66
  • 99.66
  • 99.65
  • 99.60
  • 99.52
  • 99.52
  • 99.47
  • 99.41
  • 99.35
  • 99.06
  • 99.00
  • 98.17
  • 86.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
97.0
  • 97.0
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
98.0
  • 98.0
99.68
  • 99.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
112
  • 112
99.63
  • 99.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
118
  • 118
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
119
  • 119
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
124
  • 124
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
128
  • 128
99.57
  • 99.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
133
  • 133
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
135
  • 135
99.55
  • 99.55
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
148
  • 148
99.51
  • 99.51
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
148
  • 148
99.51
  • 99.51
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
150
  • 150
  • 523
99.50
  • 99.50
  • 98.25
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
154
  • 154
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
156
  • 156
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
168
  • 168
  • 171
  • 213
99.44
  • 99.44
  • 99.43
  • 99.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
169
  • 169
  • 587
99.44
  • 99.44
  • 98.04
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
191
  • 191
  • 208
  • 272
  • 412
  • 421
  • 566
99.36
  • 99.36
  • 99.31
  • 99.09
  • 98.62
  • 98.59
  • 98.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
197
  • 197
  • 220
  • 363
  • 586
99.34
  • 99.34
  • 99.27
  • 98.79
  • 98.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
205
  • 205
  • 270
99.32
  • 99.32
  • 99.10
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
277
  • 277
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
760
  • 760
  • 1.36e3
  • 1.58e3
  • 1.77e3
  • 2.56e3
97.46
  • 97.46
  • 95.46
  • 94.71
  • 94.08
  • 91.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
943
  • 943
96.85
  • 96.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.32e3
  • 1.32e3
95.58
  • 95.58
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.95e3
  • 5.95e3
80.07
  • 80.07
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species19 genesCompare expression
Bilateria18 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070437.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000070437.

Cross-references

EnsemblENSDARG00000070437 (rpl22)
ZFINZDB-GENE-051113-276 (rpl22)
EMBLCR352256
Uniprot/SPTREMBLF1QG80, F1QG80_DANRE

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