D. rerio Gene: slc39a9 - ENSDARG00000070447 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070447
Nameslc39a9
Descriptionsolute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc56g12, zgc:101628, zip9
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.70
  • 89.70
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.12e3
  • 3.12e3
  • 1.50e4
89.54
  • 89.54
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.61
  • 88.61
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
3.63e3
  • 3.63e3
  • 3.67e3
  • 4.03e3
  • 4.30e3
  • 4.90e3
87.84
  • 87.84
  • 87.72
  • 86.52
  • 85.59
  • 83.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
3.67e3
  • 3.67e3
  • 4.89e3
  • 4.90e3
  • 6.08e3
  • 6.55e3
  • 6.82e3
87.72
  • 87.72
  • 83.61
  • 83.60
  • 79.63
  • 78.07
  • 77.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
4.16e3
  • 4.16e3
  • 4.53e3
  • 4.56e3
  • 5.05e3
  • 5.27e3
  • 5.50e3
  • 6.36e3
  • 6.63e3
  • 6.96e3
  • 7.19e3
86.07
  • 86.07
  • 84.84
  • 84.74
  • 83.10
  • 82.37
  • 81.57
  • 78.72
  • 77.79
  • 76.70
  • 75.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
  • 4.53e3
84.82
  • 84.82
  • 84.82
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
4.70e3
  • 4.70e3
  • 4.98e3
  • 5.01e3
  • 5.19e3
  • 5.39e3
  • 5.49e3
  • 6.14e3
  • 6.16e3
  • 6.26e3
  • 6.54e3
  • 6.56e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.83e3
  • 6.87e3
  • 6.97e3
  • 7.03e3
  • 7.28e3
  • 7.36e3
  • 7.47e3
  • 7.47e3
  • 7.66e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.46e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
84.27
  • 84.27
  • 83.33
  • 83.23
  • 82.62
  • 81.95
  • 81.63
  • 79.44
  • 79.39
  • 79.03
  • 78.12
  • 78.05
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.13
  • 77.01
  • 76.66
  • 76.46
  • 75.62
  • 75.36
  • 74.99
  • 74.99
  • 74.34
  • 73.52
  • 69.99
  • 69.99
  • 51.12
  • 50.61
  • 49.95
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.04
  • 84.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.50
  • 82.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
82.42
  • 82.42
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.38
  • 82.38
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.27e3
  • 5.27e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.40e3
  • 5.40e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.51e3
  • 5.51e3
81.55
  • 81.55
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.96
  • 80.96
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.75e3
  • 5.75e3
  • 5.77e3
80.74
  • 80.74
  • 80.67
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
  • 6.71e3
80.18
  • 80.18
  • 77.52
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.96e3
  • 5.96e3
  • 6.36e3
  • 7.68e3
80.04
  • 80.04
  • 78.71
  • 74.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.91
  • 79.91
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
  • 6.13e3
  • 6.29e3
  • 8.76e3
79.89
  • 79.89
  • 79.49
  • 78.95
  • 70.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.05
  • 79.05
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
  • 8.04e3
78.92
  • 78.92
  • 73.06
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.31e3
  • 6.31e3
78.86
  • 78.86
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.71e3
  • 6.71e3
77.53
  • 77.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.52e3
  • 7.52e3
74.82
  • 74.82
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.78e3
  • 7.78e3
73.95
  • 73.95
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.97
  • 71.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070447.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070447.

Cross-references

EnsemblENSDARG00000070447 (slc39a9)
ZFINZDB-GENE-060314-3 (slc39a9)
EMBLBC090821, BC155153, CU424460
Uniprot/SPTREMBLA9JT08, A9JT08_DANRE
Uniprot/SWISSPROTQ5BL29, S39A9_DANRE

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