D. rerio Gene: agr2 - ENSDARG00000070480 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070480
Nameagr2
Descriptionanterior gradient 2 [Source:ZFIN;Acc:ZDB-GENE-050417-214]
OrganismDanio rerio (zebrafish)
Synonym(s)a7mce1, wu:fj29g05, zgc:112187
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
999
  • 999
  • 4.98e3
96.66
  • 96.66
  • 83.34
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.11e3
  • 1.11e3
  • 1.26e4
96.30
  • 96.30
  • 57.82
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.52
  • 95.52
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.70e3
  • 1.70e3
  • 1.84e3
  • 2.06e3
94.30
  • 94.30
  • 93.84
  • 93.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.51
  • 93.51
AEIR
  • AEIR
CL:0000319mucus secreting cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
2.30e3
  • 2.30e3
  • 3.45e3
  • 3.45e3
  • 4.98e3
  • 4.98e3
  • 5.97e3
  • 6.64e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
92.31
  • 92.31
  • 88.46
  • 88.46
  • 83.33
  • 83.33
  • 80.00
  • 77.77
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
2.50e3
  • 2.50e3
  • 3.25e3
  • 3.44e3
  • 4.73e3
  • 4.93e3
  • 8.80e3
  • 1.12e4
  • 1.46e4
  • 1.47e4
  • 1.50e4
  • 1.66e4
  • 1.68e4
  • 1.69e4
  • 1.78e4
91.63
  • 91.63
  • 89.13
  • 88.48
  • 84.15
  • 83.49
  • 70.53
  • 62.48
  • 51.01
  • 50.68
  • 49.92
  • 44.26
  • 43.75
  • 43.47
  • 40.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
2.94e3
  • 2.94e3
  • 3.06e3
  • 3.85e3
  • 3.95e3
  • 4.19e3
  • 4.37e3
  • 7.92e3
  • 1.01e4
  • 1.33e4
  • 1.51e4
90.17
  • 90.17
  • 89.77
  • 87.10
  • 86.76
  • 85.98
  • 85.37
  • 73.49
  • 66.20
  • 55.33
  • 49.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001840semicircular canal
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
2.99e3
  • 2.99e3
  • 1.49e4
90.00
  • 90.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
  • 1.36e4
  • 2.03e4
89.77
  • 89.77
  • 54.53
  • 32.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
4.60e3
  • 4.60e3
  • 4.98e3
  • 5.43e3
  • 1.33e4
84.61
  • 84.61
  • 83.33
  • 81.81
  • 55.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.71e3
  • 4.71e3
  • 5.38e3
84.25
  • 84.25
  • 81.99
AEIR
  • AEIR
  • AEIR
UBERON:0002212macula of saccule of membranous labyrinth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 7.47e3
  • 1.49e4
83.34
  • 83.34
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002214macula of utricle of membranous labyrinth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 7.47e3
  • 1.49e4
83.34
  • 83.34
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
5.48e3
  • 5.48e3
  • 6.50e3
  • 6.79e3
  • 7.47e3
  • 7.83e3
  • 8.96e3
  • 1.02e4
  • 1.28e4
  • 1.49e4
81.65
  • 81.65
  • 78.25
  • 77.26
  • 74.99
  • 73.79
  • 69.98
  • 65.77
  • 57.14
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.70e3
  • 5.70e3
80.93
  • 80.93
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
  • 1.64e4
75.02
  • 75.02
  • 45.14
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 9.84e3
  • 1.24e4
75.00
  • 75.00
  • 67.05
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.53e3
  • 8.53e3
  • 1.12e4
  • 1.31e4
  • 1.39e4
71.43
  • 71.43
  • 62.49
  • 56.23
  • 53.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
8.65e3
  • 8.65e3
71.04
  • 71.04
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
8.96e3
  • 8.96e3
  • 1.49e4
  • 1.49e4
70.00
  • 70.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.16
  • 69.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0001846internal ear
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.40e4
62.50
  • 62.50
  • 53.03
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0000162cloaca
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.19e4
  • 1.19e4
  • 1.37e4
  • 1.37e4
  • 1.49e4
  • 1.49e4
60.00
  • 60.00
  • 54.15
  • 54.15
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.79
  • 58.79
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
  • 1.49e4
57.14
  • 57.14
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
CL:0000160goblet cell
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001430pneumatic duct
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007274crista of ampulla of anterior semicircular duct of membranous laybrinth
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007275crista of ampulla of posterior semicircular duct of membranous laybrinth
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007276crista of ampulla of lateral semicircular duct of membranous laybrinth
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000931proctodeum
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.50e4
  • 1.50e4
  • 1.75e4
49.78
  • 49.78
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.78
  • 48.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.54
  • 48.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.19
  • 47.19
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.61e4
  • 1.61e4
46.16
  • 46.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000070480.

Cross-references

EnsemblENSDARG00000070480 (agr2)
ZFINZDB-GENE-050417-214 (agr2)
EMBLAY796218, BC093250, BC152144, BX547939
Uniprot/SWISSPROTAGR2_DANRE, Q5RZ65

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