D. rerio Gene: hpcal4 - ENSDARG00000070491 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070491
Namehpcal4
Descriptionhippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-215a10.5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.69884
  • 95.69884
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.75e3
  • 2.75e3
  • 9.18e3
90.72550
  • 90.72550
  • 68.98065
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
7.33e3
  • 7.33e3
  • 1.07e4
  • 1.13e4
  • 1.62e4
  • 1.67e4
75.23070
  • 75.23070
  • 63.90202
  • 61.86774
  • 45.30276
  • 43.44556
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.61e3
  • 9.61e3
67.51897
  • 67.51897
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.73136
  • 55.73136
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.07657
  • 53.07657
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.52e4
  • 1.52e4
48.73855
  • 48.73855
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
48.62522
  • 48.62522
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
43.83249
  • 43.83249
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
32.86472
  • 32.86472
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
31.66816
  • 31.66816
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.23955
  • 25.23955
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX510301
EnsemblENSDARG00000070491 (hpcal4)
Uniprot/SPTREMBLA3KPW8, A3KPW8_DANRE
ZFINZDB-GENE-060503-307 (hpcal4)

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