D. rerio Gene: si:dkey-183j2.10 - ENSDARG00000070511 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070511
Namesi:dkey-183j2.10
Descriptionsi:dkey-183j2.10 [Source:ZFIN;Acc:ZDB-GENE-130530-729]
OrganismDanio rerio (zebrafish)
Synonym(s)zmp:0000000726
Orthologs(s)3 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
  • 4.30e3
95.39
  • 95.39
  • 85.60
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.83e3
  • 1.83e3
  • 1.80e4
93.89
  • 93.89
  • 39.75
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
4.47e3
  • 4.47e3
  • 1.17e4
  • 1.18e4
  • 1.37e4
  • 1.52e4
  • 1.54e4
  • 1.60e4
  • 1.61e4
  • 1.61e4
  • 1.70e4
  • 1.71e4
  • 1.80e4
  • 1.81e4
85.03
  • 85.03
  • 60.95
  • 60.35
  • 54.26
  • 49.16
  • 48.56
  • 46.45
  • 46.16
  • 45.96
  • 43.21
  • 42.80
  • 39.85
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
4.50e3
  • 4.50e3
  • 1.78e4
  • 1.78e4
  • 2.12e4
  • 2.14e4
  • 2.16e4
  • 2.17e4
84.93
  • 84.93
  • 40.54
  • 40.40
  • 28.88
  • 28.34
  • 27.51
  • 27.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
8.65e3
  • 8.65e3
  • 1.32e4
  • 1.86e4
71.04
  • 71.04
  • 55.74
  • 37.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
  • 1.74e4
  • 1.77e4
57.15
  • 57.15
  • 41.66
  • 40.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.41e4
  • 1.41e4
52.90
  • 52.90
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.60e4
  • 1.60e4
46.49
  • 46.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.23
  • 46.23
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.62e4
  • 1.62e4
  • 1.67e4
  • 1.75e4
45.83
  • 45.83
  • 44.03
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.56
  • 44.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.69
  • 43.69
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.72e4
  • 1.72e4
42.39
  • 42.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.39
  • 34.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi3 species3 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070511.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000070511.

Cross-references

EnsemblENSDARG00000070511 (si:dkey-183j2.10)
ZFINZDB-GENE-130530-729 (si:dkey-183j2.10)
EMBLCR933820
Uniprot/SPTREMBLE7F5R2, E7F5R2_DANRE

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