D. rerio Gene: ripply2 - ENSDARG00000070535 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070535
Nameripply2
Descriptionripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
OrganismDanio rerio (zebrafish)
Synonym(s)a2bht0
Orthologs(s)3 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.30e3
  • 5.30e3
  • 8.80e3
82.25
  • 82.25
  • 70.54
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000023Segmentation:1-4 somites
1.12e4
  • 1.12e4
  • 1.22e4
  • 1.35e4
62.47
  • 62.47
  • 59.06
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.18e4
  • 1.18e4
  • 1.48e4
  • 1.67e4
60.45
  • 60.45
  • 50.49
  • 43.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.23
  • 57.23
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.31e4
  • 1.31e4
  • 1.31e4
  • 1.39e4
56.22
  • 56.22
  • 56.22
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.41e4
  • 1.41e4
52.90
  • 52.90
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.49e4
  • 1.49e4
50.02
  • 50.02
AEIR
  • AEIR
UBERON:2000072somite 1
  • ZFS:0000023Segmentation:1-4 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000725somite 11
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007285presumptive paraxial mesoderm
  • ZFS:0000021Gastrula:90%-epiboly
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.52e4
  • 1.52e4
48.99
  • 48.99
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.65e4
  • 1.65e4
44.59
  • 44.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.07
  • 39.07
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.54
  • 38.54
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.41
  • 35.41
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
1.97e4
  • 1.97e4
34.04
  • 34.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.94
  • 33.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.89
  • 33.89
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.19e4
  • 2.19e4
  • 2.20e4
26.61
  • 26.61
  • 26.21
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.42
  • 25.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.41
  • 25.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
23.95
  • 23.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi3 species3 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070535.

Cross-references

EnsemblENSDARG00000070535 (ripply2)
ZFINZDB-GENE-060113-2 (ripply2)
EMBLAB212220, BC162794, BC162809, BX649468
Uniprot/SPTREMBLB3DHK1, B3DHK1_DANRE
Uniprot/SWISSPROTQ2WG79, RIPP2_DANRE

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