D. rerio Gene: arf3a - ENSDARG00000070539 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070539
Namearf3a
DescriptionADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc66h11, zgc:92190
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
1.83e3
  • 1.83e3
  • 1.49e4
  • 1.65e4
93.89
  • 93.89
  • 49.94
  • 44.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
  • 4.45e3
87.44
  • 87.44
  • 85.09
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
5.85e3
  • 5.85e3
  • 1.21e4
  • 1.31e4
  • 1.44e4
  • 1.47e4
80.43
  • 80.43
  • 59.40
  • 56.20
  • 51.83
  • 50.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.95
  • 79.95
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.22e3
  • 8.22e3
72.47
  • 72.47
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.25e3
  • 8.25e3
  • 1.26e4
  • 1.42e4
72.39
  • 72.39
  • 57.71
  • 52.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
  • 1.47e4
  • 1.49e4
  • 1.50e4
  • 1.54e4
  • 1.56e4
  • 1.69e4
  • 1.79e4
58.67
  • 58.67
  • 50.68
  • 50.20
  • 49.92
  • 48.53
  • 47.77
  • 43.43
  • 40.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.32e4
  • 1.32e4
55.95
  • 55.95
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.40
  • 37.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.18
  • 32.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.54e4
  • 2.54e4
15.10
  • 15.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Cross-references

EnsemblENSDARG00000070539 (arf3a)
ZFINZDB-GENE-040801-176 (arf3a)
EMBLBC075924, CR352210
Uniprot/SPTREMBLQ6DHP3, Q6DHP3_DANRE

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