D. rerio Gene: si:ch211-93g23.2 - ENSDARG00000070558 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070558
Namesi:ch211-93g23.2
Descriptionsi:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
OrganismDanio rerio (zebrafish)
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
86.34
  • 86.34
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.20e3
  • 6.20e3
79.24
  • 79.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.84
  • 77.84
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.96e3
  • 6.96e3
  • 1.95e4
76.71
  • 76.71
  • 34.73
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.73
  • 72.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.69
  • 59.69
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.42e4
  • 1.42e4
  • 1.61e4
52.49
  • 52.49
  • 46.07
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.44e4
  • 1.44e4
  • 1.95e4
  • 2.14e4
  • 2.32e4
51.62
  • 51.62
  • 34.78
  • 28.29
  • 22.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.91
  • 47.91
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.64e4
  • 1.64e4
45.01
  • 45.01
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.63
  • 44.63
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.11
  • 44.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.69e4
  • 1.69e4
43.28
  • 43.28
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.71e4
  • 1.71e4
42.63
  • 42.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.58
  • 40.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.32
  • 36.32
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.39
  • 33.39
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
2.06e4
  • 2.06e4
31.15
  • 31.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
22.84
  • 22.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070558.

Cross-references

EnsemblENSDARG00000070558 (si:ch211-93g23.2)
ZFINZDB-GENE-090312-164 (si:ch211-93g23.2)
EMBLAL929396
Uniprot/SPTREMBLB7ZD59, B7ZD59_DANRE

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