D. rerio Gene: zgc:162509 - ENSDARG00000070604 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070604
Namezgc:162509
Descriptionzgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7160392

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.99e3
  • 1.99e3
93.34
  • 93.34
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.08e3
  • 2.08e3
93.03
  • 93.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.26
  • 86.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.51
  • 84.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.18e3
  • 5.18e3
  • 1.49e4
82.64
  • 82.64
  • 50.15
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
79.22
  • 79.22
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.42e3
  • 6.42e3
78.50
  • 78.50
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.44e3
  • 6.44e3
  • 6.60e3
  • 7.10e3
  • 1.04e4
  • 1.36e4
78.43
  • 78.43
  • 77.92
  • 76.21
  • 65.15
  • 54.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
77.88
  • 77.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.72
  • 74.72
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.31
  • 73.31
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.70e3
  • 8.70e3
70.88
  • 70.88
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
67.98
  • 67.98
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
9.87e3
  • 9.87e3
  • 1.03e4
  • 1.14e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.24e4
  • 1.29e4
  • 1.29e4
  • 1.45e4
  • 1.50e4
  • 1.50e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.83e4
  • 1.83e4
66.96
  • 66.96
  • 65.61
  • 61.75
  • 59.08
  • 59.08
  • 59.08
  • 58.32
  • 58.32
  • 56.65
  • 56.65
  • 51.42
  • 49.94
  • 49.92
  • 40.52
  • 40.35
  • 40.18
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.21e4
  • 1.21e4
  • 1.85e4
59.49
  • 59.49
  • 37.91
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
56.98
  • 56.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
1.30e4
  • 1.30e4
  • 1.55e4
  • 1.68e4
56.58
  • 56.58
  • 48.16
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.93
  • 52.93
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.44
  • 48.44
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
  • 1.78e4
  • 1.78e4
  • 2.14e4
  • 2.16e4
  • 2.36e4
47.49
  • 47.49
  • 40.40
  • 40.27
  • 28.47
  • 27.58
  • 20.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.58
  • 46.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.50
  • 45.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000070604 (zgc:162509)
ZFINZDB-GENE-050809-100 (zgc:162509)
EMBLBX005429
Uniprot/SPTREMBLF1QNU2, F1QNU2_DANRE, F1QY25, F1QY25_DANRE

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