D. rerio Gene: ncalda - ENSDARG00000070688 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070688
Namencalda
Descriptionneurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:175182
Orthologs(s)23 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
175
  • 175
  • 1.57e3
  • 4.42e3
  • 1.52e4
99.42
  • 99.42
  • 94.75
  • 85.20
  • 48.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
706
  • 706
  • 2.14e3
97.64
  • 97.64
  • 92.83
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
944
  • 944
  • 4.35e3
96.84
  • 96.84
  • 85.42
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.18e3
  • 1.18e3
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.28e3
  • 1.28e3
  • 1.64e3
  • 1.91e3
  • 2.40e3
  • 2.56e3
  • 3.69e3
  • 3.84e3
  • 7.08e3
  • 7.52e3
  • 7.55e3
95.70
  • 95.70
  • 94.51
  • 93.62
  • 91.97
  • 91.43
  • 87.66
  • 87.13
  • 76.29
  • 74.81
  • 74.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.24
  • 93.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
2.10e3
  • 2.10e3
  • 3.21e3
  • 4.85e3
  • 5.62e3
  • 6.11e3
92.95
  • 92.95
  • 89.27
  • 83.78
  • 81.19
  • 79.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.58e3
  • 2.58e3
  • 5.10e3
  • 5.82e3
  • 6.03e3
  • 7.22e3
  • 9.75e3
91.37
  • 91.37
  • 82.94
  • 80.52
  • 79.82
  • 75.81
  • 67.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.68
  • 90.68
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.86e3
  • 2.86e3
  • 4.46e3
  • 6.83e3
90.43
  • 90.43
  • 85.05
  • 77.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.08
  • 89.08
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
3.56e3
  • 3.56e3
  • 3.83e3
  • 4.01e3
  • 4.16e3
  • 4.71e3
  • 4.78e3
  • 5.19e3
  • 6.54e3
  • 6.68e3
  • 7.04e3
  • 7.21e3
  • 7.23e3
  • 7.78e3
  • 8.48e3
88.07
  • 88.07
  • 87.17
  • 86.59
  • 86.08
  • 84.22
  • 83.99
  • 82.63
  • 78.10
  • 77.63
  • 76.44
  • 75.86
  • 75.78
  • 73.94
  • 71.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.11
  • 87.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.73
  • 86.73
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.16e3
  • 4.16e3
86.08
  • 86.08
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.20e3
  • 4.20e3
85.94
  • 85.94
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
85.01
  • 85.01
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.03
  • 83.03
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.42e3
  • 5.42e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.35
  • 80.35
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
  • 7.32e3
79.67
  • 79.67
  • 75.50
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.47e3
  • 6.47e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.35
  • 77.35
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.01e3
  • 7.01e3
76.53
  • 76.53
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.75e3
  • 7.75e3
  • 7.96e3
74.05
  • 74.05
  • 73.34
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.64
  • 73.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.89
  • 72.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.83
  • 71.83
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
60.12
  • 60.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070688.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Opisthokonta5 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070688.

Cross-references

EnsemblENSDARG00000070688 (ncalda)
ZFINZDB-GENE-080220-28 (ncalda)
EMBLCU104697
Uniprot/SPTREMBLF1QMZ6, F1QMZ6_DANRE

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