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D. rerio Gene: slc25a18 - ENSDARG00000070717 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070717
Nameslc25a18
Descriptionsolute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7143718
Orthologs(s)27 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.83e3
  • 3.83e3
87.19
  • 87.19
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
77.86
  • 77.86
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
  • 8.71e3
77.03
  • 77.03
  • 70.85
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.08e3
  • 8.08e3
  • 1.34e4
72.96
  • 72.96
  • 55.07
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.04e4
  • 1.04e4
  • 1.05e4
  • 1.10e4
  • 1.12e4
  • 1.22e4
65.19
  • 65.19
  • 64.91
  • 63.32
  • 62.57
  • 59.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.10
  • 65.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
60.45
  • 60.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.29e4
  • 1.29e4
  • 1.31e4
56.65
  • 56.65
  • 56.25
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.01
  • 56.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.26
  • 54.26
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.41e4
  • 1.41e4
  • 1.45e4
52.64
  • 52.64
  • 51.54
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.86
  • 51.86
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.05
  • 51.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.48
  • 48.48
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.54e4
  • 1.54e4
  • 1.58e4
48.35
  • 48.35
  • 47.25
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.34
  • 47.34
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.97
  • 46.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.98
  • 43.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.59
  • 38.59
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.50
  • 37.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria22 species27 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070717.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression
Opisthokonta12 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070717.

Cross-references

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