D. rerio Gene: gabra5 - ENSDARG00000070730 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070730
Namegabra5
Descriptiongamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-93p24.1
Orthologs(s)18 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.20e3
  • 2.20e3
92.63
  • 92.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
91.35
  • 91.35
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
  • 9.49e3
77.00
  • 77.00
  • 68.22
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
8.21e3
  • 8.21e3
  • 1.06e4
  • 1.67e4
  • 1.68e4
  • 1.77e4
72.51
  • 72.51
  • 64.67
  • 44.22
  • 43.62
  • 40.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.61e3
  • 9.61e3
  • 1.34e4
67.82
  • 67.82
  • 55.29
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.46
  • 57.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.39
  • 42.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.62e4
  • 2.62e4
12.15
  • 12.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070730.

Cross-references

EnsemblENSDARG00000070730 (gabra5)
ZFINZDB-GENE-081104-30 (gabra5)
EMBLCR405707
Uniprot/SPTREMBLE9QE70, E9QE70_DANRE, F1QZ29, F1QZ29_DANRE

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