D. rerio Gene: rnd2 - ENSDARG00000070735 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070735
Namernd2
DescriptionRho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
OrganismDanio rerio (zebrafish)
Synonym(s)arhn, rho, si:dz163l24.1, zgc:153204
Orthologs(s)16 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.48e3
  • 6.48e3
78.30
  • 78.30
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.91
  • 74.91
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
9.07e3
  • 9.07e3
  • 9.53e3
  • 1.09e4
  • 1.38e4
  • 1.54e4
69.63
  • 69.63
  • 68.10
  • 63.38
  • 53.66
  • 48.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.79e3
  • 9.79e3
  • 1.01e4
67.23
  • 67.23
  • 66.14
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.77e4
62.36
  • 62.36
  • 40.75
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.75
  • 61.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.30
  • 53.30
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.22
  • 53.22
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.69
  • 51.69
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.46e4
  • 1.46e4
  • 1.52e4
51.06
  • 51.06
  • 49.25
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.65
  • 49.65
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.51
  • 49.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.46
  • 46.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.76
  • 43.76
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.77
  • 42.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.84e4
  • 1.84e4
38.30
  • 38.30
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
  • 2.01e4
36.41
  • 36.41
  • 32.64
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.47
  • 34.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.93
  • 33.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.83
  • 32.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eumetazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070735.

Cross-references

EnsemblENSDARG00000070735 (rnd2)
ZFINZDB-GENE-030616-177 (rnd2)
EMBLBX572620, CR855865
Uniprot/SPTREMBLF1RCR8, F1RCR8_DANRE

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