Gene: cyp2x9 - ENSDARG00000070775 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000070775
Name	cyp2x9
Description	cytochrome P450, family 2, subfamily X, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-061027-109]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:153647
Orthologs(s)	1 orthologs
Paralog(s)	44 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	989 989	96.69 96.69	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.57e3 1.57e3	94.74 94.74	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	3.00e3 3.00e3 2.19e4	89.95 89.95 26.77	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	7.02e3 7.02e3	76.50 76.50	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	9.73e3 9.73e3	67.43 67.43	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	59.20 59.20	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages ZFS:0000037Larval:Day 5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage	1.24e4 1.24e4 2.23e4 2.39e4	58.32 58.32 25.42 19.91	AEIR AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000022Gastrula:Bud	1.47e4 1.47e4	50.79 50.79	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	2.00e4 2.00e4 2.04e4	33.08 33.08 31.70	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.06e4 2.06e4	31.04 31.04	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	2.43e4 2.43e4	18.70 18.70	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.45e4 2.45e4	17.93 17.93	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	1 species Xenopus tropicalis (western clawed frog)	1 gene ENSXETG00000012640 cyp2j2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000070775.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	3 genes ENSDARG00000043997 cyp2x8 ENSDARG00000044002 cyp2x7 ENSDARG00000079653 cyp2x6	Compare expression	[+]
Opisthokonta	44 genes ENSDARG00000004051 CR354540.1 ENSDARG00000004262 cyp46a1.2 ENSDARG00000004964 cyp4t8 ENSDARG00000008858 cyp7b1 ENSDARG00000012137 cyp46a1.1 ENSDARG00000013524 cyp2ae1 ENSDARG00000015575 cyp3c1 ENSDARG00000017982 cyp39a1 ENSDARG00000018485 cyp2v1 ENSDARG00000022631 cyp2p9 ENSDARG00000026548 cyp2u1 ENSDARG00000033566 cyp17a1 ENSDARG00000035569 cyp1d1 ENSDARG00000037550 cyp21a2 ENSDARG00000037873 cyp3c3 ENSDARG00000037874 cyp3c2 ENSDARG00000040433 cyp2k22 ENSDARG00000042641 cyp51 ENSDARG00000042978 cyp2p6 ENSDARG00000042980 cyp2p7 ENSDARG00000042982 cyp2p8 ENSDARG00000042990 cyp2p10 ENSDARG00000043997 cyp2x8 ENSDARG00000044002 cyp2x7 ENSDARG00000053068 cyp8b1 ENSDARG00000053530 cyp4f3 ENSDARG00000053966 cyp17a2 ENSDARG00000056587 cyp2r1 ENSDARG00000061585 cyp4v7 ENSDARG00000062132 cyp4v8 ENSDARG00000068493 si:zfos-411a11.2 ENSDARG00000068934 cyp1b1 ENSDARG00000069018 cyp7a1 ENSDARG00000070021 cyp3c4 ENSDARG00000079653 cyp2x6 ENSDARG00000089177 cyp46a1.3 ENSDARG00000093477 CYP46A1 (1 to many) ENSDARG00000094057 cyp2j20 ENSDARG00000097556 cyp8b2 ENSDARG00000097559 cyp8b3 ENSDARG00000098315 cyp1a ENSDARG00000101195 cyp1c1 ENSDARG00000101423 cyp2y3 ENSDARG00000101789 cyp1c2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000070775.

Cross-references

Ensembl	ENSDARG00000070775 (cyp2x9)
ZFIN	ZDB-GENE-061027-109 (cyp2x9)
Uniprot/SPTREMBL	F1QYD1, F1QYD1_DANRE