D. rerio Gene: rln3a - ENSDARG00000070780 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070780
Namerln3a
Descriptionrelaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
OrganismDanio rerio (zebrafish)
Synonym(s)rflc2, rln3, rln3gn, rlx 3a, rlx3a
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
2.86e3
  • 2.86e3
  • 1.49e4
  • 1.77e4
90.43
  • 90.43
  • 49.99
  • 40.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.19e3
  • 3.19e3
  • 1.01e4
89.32
  • 89.32
  • 66.12
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.56e3
  • 5.56e3
  • 1.63e4
  • 1.65e4
81.37
  • 81.37
  • 45.29
  • 44.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001016nervous system
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
5.97e3
  • 5.97e3
  • 5.97e3
80.00
  • 80.00
  • 80.00
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000026Segmentation:14-19 somites
5.98e3
  • 5.98e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
6.87e3
  • 6.87e3
  • 2.07e4
  • 2.16e4
  • 2.31e4
  • 2.42e4
76.99
  • 76.99
  • 30.76
  • 27.77
  • 22.57
  • 19.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003040central gray substance of midbrain
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 1.16e4
  • 1.40e4
  • 1.41e4
75.00
  • 75.00
  • 61.10
  • 53.10
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
8.54e3
  • 8.54e3
  • 8.96e3
71.42
  • 71.42
  • 69.99
AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
9.34e3
  • 9.34e3
  • 1.09e4
  • 1.10e4
68.74
  • 68.74
  • 63.61
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.44
  • 67.44
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
  • 1.17e4
62.50
  • 62.50
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.26e4
  • 1.26e4
  • 1.32e4
  • 1.75e4
57.80
  • 57.80
  • 55.70
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.51e4
  • 1.51e4
49.51
  • 49.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.79
  • 42.79
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.84
  • 35.84
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.69
  • 31.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.80
  • 30.80
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.72
  • 30.72
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.42
  • 23.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.46e4
  • 2.46e4
17.47
  • 17.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070780.

Cross-references

EnsemblENSDARG00000070780 (rln3a)
ZFINZDB-GENE-050310-3 (rln3a)
EMBLAY834223, BX546473, EU437454
Uniprot/SPTREMBLQ2VT45, Q2VT45_DANRE

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