Gene: zgc:109744 - ENSDARG00000070800 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000070800
Name	zgc:109744
Description	zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
Organism	Danio rerio (zebrafish)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	2.13e3 2.13e3 3.62e3	92.87 92.87 87.88	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	2.19e3 2.19e3 4.69e3	92.68 92.68 84.29	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	5.25e3 5.25e3	82.41 82.41	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	5.40e3 5.40e3	81.92 81.92	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	7.08e3 7.08e3	76.31 76.31	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	7.09e3 7.09e3	76.25 76.25	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	7.38e3 7.38e3 7.64e3 9.42e3 1.23e4 1.60e4	75.29 75.29 74.42 68.46 58.80 46.49	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.64e3 7.64e3	74.42 74.42	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	7.77e3 7.77e3	73.98 73.98	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	8.54e3 8.54e3 1.50e4	71.42 71.42 49.76	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	8.62e3 8.62e3	71.15 71.15	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	8.90e3 8.90e3	70.21 70.21	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	9.24e3 9.24e3	69.07 69.07	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.04e4 1.04e4 1.36e4	65.17 65.17 54.50	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.74 64.74	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.08e4 1.08e4	63.71 63.71	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.10e4 1.10e4	63.21 63.21	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.15e4 1.15e4	61.54 61.54	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.19e4 1.19e4	60.09 60.09	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.19e4 1.19e4	60.05 60.05	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.26e4 1.26e4	57.93 57.93	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.28e4 1.28e4 1.90e4	57.18 57.18 36.52	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.45e4 1.45e4	51.58 51.58	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.50e4 1.50e4	49.67 49.67	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	48.97 48.97	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSDARG00000070800 (zgc:109744)
ZFIN	ZDB-GENE-050809-146 (zgc:109744)
EMBL	CU571162
Uniprot/SPTREMBL	F1QCR2, F1QCR2_DANRE