D. rerio Gene: zgc:109744 - ENSDARG00000070800 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070800
Namezgc:109744
Descriptionzgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.13e3
  • 2.13e3
  • 3.62e3
92.87
  • 92.87
  • 87.88
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.19e3
  • 2.19e3
  • 4.69e3
92.68
  • 92.68
  • 84.29
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.25e3
  • 5.25e3
82.41
  • 82.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
81.92
  • 81.92
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.38e3
  • 7.38e3
  • 7.64e3
  • 9.42e3
  • 1.23e4
  • 1.60e4
75.29
  • 75.29
  • 74.42
  • 68.46
  • 58.80
  • 46.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.64e3
  • 7.64e3
74.42
  • 74.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.98
  • 73.98
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.54e3
  • 8.54e3
  • 1.50e4
71.42
  • 71.42
  • 49.76
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
71.15
  • 71.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.21
  • 70.21
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
69.07
  • 69.07
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.36e4
65.17
  • 65.17
  • 54.50
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.74
  • 64.74
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.71
  • 63.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.21
  • 63.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.54
  • 61.54
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.09
  • 60.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.05
  • 60.05
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.93
  • 57.93
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.90e4
57.18
  • 57.18
  • 36.52
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.58
  • 51.58
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.67
  • 49.67
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
48.97
  • 48.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000070800 (zgc:109744)
ZFINZDB-GENE-050809-146 (zgc:109744)
EMBLCU571162
Uniprot/SPTREMBLF1QCR2, F1QCR2_DANRE

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