D. rerio Gene: si:ch211-156l18.6 - ENSDARG00000070812 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070812
Namesi:ch211-156l18.6
Descriptionsi:ch211-156l18.6 [Source:ZFIN;Acc:ZDB-GENE-141222-85]
OrganismDanio rerio (zebrafish)
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
49.80
  • 49.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.66
  • 30.66
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.02
  • 29.02
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.15e4
  • 2.15e4
27.87
  • 27.87
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.14
  • 27.14
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.96
  • 25.96
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
2.27e4
  • 2.27e4
  • 2.36e4
  • 2.67e4
24.14
  • 24.14
  • 21.14
  • 10.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
20.88
  • 20.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala17 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000070812.

Cross-references

EnsemblENSDARG00000070812 (si:ch211-156l18.6)
ZFINZDB-GENE-141222-85 (si:ch211-156l18.6)
EMBLBX469912
Uniprot/SPTREMBLE7F162, E7F162_DANRE, E9QC66, E9QC66_DANRE

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