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D. rerio Gene: zgc:136858 - ENSDARG00000070830 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070830
Namezgc:136858
Descriptionzgc:136858 [Source:ZFIN;Acc:ZDB-GENE-060421-6632]
OrganismDanio rerio (zebrafish)
Synonym(s)fb68f01, wu:fb68f01
Orthologs(s)7 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.86
  • 89.86
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.38
  • 87.38
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.54e3
  • 6.54e3
78.09
  • 78.09
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
7.26e3
  • 7.26e3
  • 8.42e3
  • 1.23e4
  • 1.26e4
  • 1.27e4
75.70
  • 75.70
  • 71.82
  • 58.66
  • 57.65
  • 57.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.99
  • 63.99
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.12e4
  • 1.12e4
62.41
  • 62.41
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.17e4
  • 1.17e4
  • 1.24e4
  • 1.29e4
60.88
  • 60.88
  • 58.51
  • 56.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
  • 1.36e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.56e4
60.74
  • 60.74
  • 57.95
  • 57.81
  • 57.29
  • 54.38
  • 50.70
  • 50.48
  • 50.14
  • 50.00
  • 47.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 1.22e4
  • 1.29e4
  • 1.29e4
  • 1.30e4
  • 1.31e4
  • 1.31e4
  • 1.32e4
  • 1.34e4
  • 1.37e4
  • 1.38e4
  • 1.39e4
  • 1.43e4
  • 1.44e4
  • 1.47e4
  • 1.47e4
60.24
  • 60.24
  • 59.12
  • 56.77
  • 56.71
  • 56.63
  • 56.24
  • 56.14
  • 55.66
  • 55.04
  • 54.26
  • 53.67
  • 53.60
  • 52.00
  • 51.82
  • 50.90
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.06
  • 60.06
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.27e4
  • 1.27e4
  • 1.28e4
  • 1.37e4
  • 1.40e4
  • 1.48e4
  • 1.50e4
57.40
  • 57.40
  • 57.26
  • 54.06
  • 53.24
  • 50.34
  • 49.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 2.15e4
55.80
  • 55.80
  • 27.94
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.57
  • 54.57
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.46e4
  • 1.46e4
51.08
  • 51.08
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.46e4
  • 1.46e4
50.96
  • 50.96
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
  • 1.78e4
50.46
  • 50.46
  • 40.35
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
  • 2.30e4
47.90
  • 47.90
  • 23.03
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.67e4
  • 1.67e4
44.15
  • 44.15
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.06
  • 42.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.44
  • 41.44
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.06
  • 40.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.15
  • 37.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.48
  • 22.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000070830.

Cross-references

EnsemblENSDARG00000070830 (zgc:136858)
ZFINZDB-GENE-060421-6632 (zgc:136858)
EMBLCR387984
Uniprot/SPTREMBLF1QM18, F1QM18_DANRE

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