D. rerio Gene: bcl6a - ENSDARG00000070864 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070864
Namebcl6a
DescriptionB-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
OrganismDanio rerio (zebrafish)
Synonym(s)bcl6, zgc:73162
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
  • 7.47e3
  • 1.05e4
  • 1.28e4
  • 1.50e4
90.08
  • 90.08
  • 74.98
  • 64.98
  • 57.12
  • 49.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.26
  • 84.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.10
  • 81.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
  • 8.16e3
77.34
  • 77.34
  • 72.69
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
7.69e3
  • 7.69e3
  • 9.87e3
  • 1.29e4
  • 1.31e4
  • 1.37e4
74.26
  • 74.26
  • 66.94
  • 56.97
  • 56.24
  • 53.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.65
  • 73.65
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.96e3
  • 7.96e3
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.36e3
  • 8.36e3
  • 1.50e4
72.00
  • 72.00
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
8.65e3
  • 8.65e3
  • 9.33e3
  • 1.05e4
  • 1.41e4
71.04
  • 71.04
  • 68.74
  • 64.69
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.61
  • 70.61
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.12
  • 68.12
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
9.60e3
  • 9.60e3
  • 1.07e4
  • 1.09e4
67.85
  • 67.85
  • 64.28
  • 63.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.52
  • 66.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.46
  • 66.46
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.05e4
  • 1.05e4
  • 1.33e4
64.93
  • 64.93
  • 55.63
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.07e4
  • 1.07e4
  • 1.07e4
64.23
  • 64.23
  • 64.20
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.14
  • 64.14
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.58
  • 63.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.94
  • 62.94
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.14e4
  • 1.14e4
  • 1.20e4
61.88
  • 61.88
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.02
  • 61.02
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.19e4
  • 1.19e4
  • 1.35e4
60.04
  • 60.04
  • 54.63
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.20e4
  • 1.20e4
  • 1.40e4
59.84
  • 59.84
  • 53.19
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.91
  • 58.91
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.29e4
  • 1.29e4
56.85
  • 56.85
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.34e4
  • 1.34e4
  • 1.34e4
55.24
  • 55.24
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.34e4
  • 1.34e4
  • 1.41e4
  • 1.41e4
54.97
  • 54.97
  • 52.75
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000031Pharyngula:Prim-25
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
ZFA:0005491optic furrow (Danio)
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.88
  • 49.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000070864 (bcl6a)
ZFINZDB-GENE-040426-1696 (bcl6a)
EMBLFP101882
Uniprot/SPTREMBLF1R5N6, F1R5N6_DANRE

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