D. rerio Gene: cpne5b - ENSDARG00000070919 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000070919
Namecpne5b
Descriptioncopine Vb [Source:ZFIN;Acc:ZDB-GENE-040426-1398]
OrganismDanio rerio (zebrafish)
Synonym(s)cpne5, zgc:64194
Orthologs(s)20 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.17
  • 77.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.98e3
  • 8.98e3
69.92
  • 69.92
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.09e3
  • 9.09e3
69.57
  • 69.57
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
  • 1.07e4
67.47
  • 67.47
  • 64.10
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.05e4
  • 1.05e4
64.78
  • 64.78
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.19e4
  • 1.19e4
  • 1.22e4
59.99
  • 59.99
  • 59.06
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.78
  • 49.78
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
  • 2.17e4
43.97
  • 43.97
  • 27.27
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.75e4
  • 1.75e4
  • 1.87e4
  • 2.14e4
  • 2.15e4
  • 2.31e4
41.43
  • 41.43
  • 37.29
  • 28.44
  • 28.03
  • 22.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.98
  • 40.98
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.86e4
  • 1.86e4
  • 2.07e4
37.79
  • 37.79
  • 30.71
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.40
  • 30.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.88
  • 29.88
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.87
  • 28.87
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.75
  • 23.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000070919.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000070919 (cpne5b)
ZFINZDB-GENE-040426-1398 (cpne5b)
Uniprot/SPTREMBLQ7T296, Q7T296_DANRE

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