D. rerio Gene: ldhbb - ENSDARG00000071076 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071076
Nameldhbb
Descriptionlactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
OrganismDanio rerio (zebrafish)
Synonym(s)ldh-b-b, zgc:92882

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
164
  • 164
  • 8.72e3
99.44966
  • 99.44966
  • 70.52457
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
349
  • 349
98.82379
  • 98.82379
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
461
  • 461
  • 6.48e3
  • 1.27e4
  • 1.29e4
98.44445
  • 98.44445
  • 78.11654
  • 57.12595
  • 56.24156
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.61e3
  • 1.61e3
  • 3.43e3
94.57861
  • 94.57861
  • 88.41962
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.40532
  • 92.40532
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
2.56e3
  • 2.56e3
  • 1.40e4
  • 1.57e4
91.36767
  • 91.36767
  • 52.72371
  • 47.09724
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
2.61e3
  • 2.61e3
  • 2.77e3
  • 4.94e3
  • 7.78e3
  • 1.02e4
  • 1.11e4
  • 1.28e4
  • 1.45e4
  • 1.67e4
  • 1.71e4
  • 1.77e4
  • 1.77e4
  • 1.77e4
  • 1.78e4
91.19331
  • 91.19331
  • 90.62652
  • 83.31767
  • 73.69621
  • 65.60979
  • 62.48816
  • 56.79259
  • 50.89926
  • 43.72534
  • 42.28197
  • 40.21909
  • 40.19288
  • 40.01735
  • 39.69030
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
2.93e3
  • 2.93e3
  • 1.42e4
  • 1.51e4
  • 1.77e4
  • 1.80e4
  • 1.80e4
  • 1.93e4
  • 1.98e4
90.09518
  • 90.09518
  • 51.96494
  • 48.83494
  • 40.27188
  • 39.23031
  • 39.14302
  • 34.74389
  • 33.06745
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.27e3
  • 4.27e3
85.58464
  • 85.58464
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.70e3
  • 4.70e3
  • 1.40e4
84.10203
  • 84.10203
  • 52.80520
AEIR
  • AEIR
  • AEIR
UBERON:0001787photoreceptor layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.55e3
  • 5.55e3
  • 8.88e3
  • 9.25e3
81.24831
  • 81.24831
  • 69.99324
  • 68.74493
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.92e3
  • 5.92e3
  • 8.97e3
  • 8.98e3
79.99219
  • 79.99219
  • 69.70162
  • 69.65126
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
72.86281
  • 72.86281
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
70.92931
  • 70.92931
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.21e3
  • 9.21e3
68.86533
  • 68.86533
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.48e4
55.16372
  • 55.16372
  • 49.93916
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.14846
  • 55.14846
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.13494
  • 55.13494
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.20080
  • 50.20080
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.02552
  • 50.02552
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
1.50e4
  • 1.50e4
49.34247
  • 49.34247
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.52e4
  • 1.52e4
  • 1.71e4
48.75690
  • 48.75690
  • 42.20601
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.69e4
  • 1.69e4
42.73216
  • 42.73216
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.59745
  • 39.59745
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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