D. rerio Gene: si:ch211-133n4.9 - ENSDARG00000071216 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071216
Namesi:ch211-133n4.9
Descriptionsi:ch211-133n4.9 [Source:ZFIN;Acc:ZDB-GENE-070424-126]
OrganismDanio rerio (zebrafish)
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
529
  • 529
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.95e3
  • 9.95e3
66.68
  • 66.68
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.19
  • 60.19
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.01
  • 57.01
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.63
  • 50.63
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.44
  • 45.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.80
  • 24.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000071216.

Cross-references

EnsemblENSDARG00000071216 (si:ch211-133n4.9)
ZFINZDB-GENE-070424-126 (si:ch211-133n4.9)
EMBLAL928975
Uniprot/SPTREMBLB0R0N8, B0R0N8_DANRE

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