D. rerio Gene: zgc:158445 - ENSDARG00000071223 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071223
Namezgc:158445
Descriptionzgc:158445 [Source:ZFIN;Acc:ZDB-GENE-061215-78]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-133n4.8
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
91.38
  • 91.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
69.07
  • 69.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.16e4
  • 1.16e4
  • 1.66e4
61.02
  • 61.02
  • 44.51
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.77
  • 59.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.22e4
  • 1.22e4
59.18
  • 59.18
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.32
  • 50.32
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.34
  • 45.34
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.86e4
  • 1.86e4
37.85
  • 37.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.08
  • 36.08
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
2.06e4
  • 2.06e4
  • 2.18e4
31.01
  • 31.01
  • 26.86
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.20e4
  • 2.20e4
  • 2.53e4
26.33
  • 26.33
  • 15.12
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000071223.

Cross-references

EnsemblENSDARG00000071223 (zgc:158445)
ZFINZDB-GENE-061215-78 (zgc:158445)
EMBLAL928975
Uniprot/SPTREMBLF6PBY5, F6PBY5_DANRE

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