D. rerio Gene: si:ch211-197g15.7 - ENSDARG00000071355 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071355
Namesi:ch211-197g15.7
Descriptionsi:ch211-197g15.7 [Source:ZFIN;Acc:ZDB-GENE-030131-4763]
OrganismDanio rerio (zebrafish)
Synonym(s)fd59c04, wu:fd59c04
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
4.98e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.47e4
  • 1.74e4
  • 1.77e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
  • 1.84e4
83.33
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 50.68
  • 41.68
  • 40.69
  • 40.59
  • 40.53
  • 40.53
  • 40.40
  • 40.36
  • 40.34
  • 40.18
  • 39.75
  • 39.40
  • 38.57
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.50
  • 67.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.32
  • 65.32
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.20e4
  • 1.20e4
  • 1.31e4
  • 1.52e4
59.69
  • 59.69
  • 56.16
  • 49.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.97
  • 58.97
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.31e4
  • 1.31e4
56.05
  • 56.05
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.36
  • 55.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.06
  • 55.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.36e4
  • 1.36e4
  • 1.61e4
  • 1.62e4
54.43
  • 54.43
  • 46.25
  • 45.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.36
  • 54.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.23
  • 54.23
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.18
  • 51.18
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.52
  • 47.52
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.25
  • 41.25
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
  • 1.87e4
  • 1.92e4
  • 2.08e4
  • 2.38e4
40.40
  • 40.40
  • 37.31
  • 35.74
  • 30.47
  • 20.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.67
  • 38.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.29
  • 37.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.65
  • 36.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.89e4
  • 1.89e4
  • 2.15e4
36.57
  • 36.57
  • 28.13
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.92e4
  • 1.92e4
  • 2.03e4
35.70
  • 35.70
  • 31.87
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi4 genesCompare expression
Clupeocephala7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000071355.

Cross-references

EnsemblENSDARG00000071355 (si:ch211-197g15.7)
ZFINZDB-GENE-030131-4763 (si:ch211-197g15.7)
EMBLBX649327
Uniprot/SPTREMBLQ1LVY7, Q1LVY7_DANRE

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