D. rerio Gene: celf5a - ENSDARG00000071375 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071375
Namecelf5a
Descriptioncugbp, Elav-like family member 5a [Source:ZFIN;Acc:ZDB-GENE-050208-746]
OrganismDanio rerio (zebrafish)
Synonym(s)brunol5, celf5, celf5gn, si:ch211-202d4.1, si:ch211-202d4.1gn
Orthologs(s)17 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.46e3
  • 2.46e3
  • 1.06e4
  • 1.42e4
  • 1.93e4
  • 1.93e4
91.75
  • 91.75
  • 64.44
  • 52.33
  • 35.36
  • 35.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
3.14e3
  • 3.14e3
  • 1.29e4
  • 1.34e4
89.48
  • 89.48
  • 56.79
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
  • 1.46e4
87.08
  • 87.08
  • 51.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.20e3
  • 8.20e3
  • 1.22e4
  • 1.31e4
72.54
  • 72.54
  • 59.08
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.73
  • 70.73
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.35e4
  • 1.35e4
54.91
  • 54.91
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.39e4
  • 1.39e4
53.31
  • 53.31
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.75e4
  • 1.75e4
41.49
  • 41.49
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.75e4
  • 1.75e4
  • 1.78e4
41.27
  • 41.27
  • 40.54
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.96
  • 33.96
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.82
  • 28.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
24.03
  • 24.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria4 genesCompare expression
Opisthokonta6 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000071375.

Cross-references

EnsemblENSDARG00000071375 (celf5a)
ZFINZDB-GENE-050208-746 (celf5a)
EMBLAL929135, BC163416, BX510913, BX664613
Uniprot/SPTREMBLB3DJA7, B3DJA7_DANRE, F1R633, F1R633_DANRE, Q1LVH7, Q1LVH7_DANRE

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