D. rerio Gene: si:dkey-78l4.6 - ENSDARG00000071389 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071389
Namesi:dkey-78l4.6
Descriptionsi:dkey-78l4.6 [Source:ZFIN;Acc:ZDB-GENE-060503-83]
OrganismDanio rerio (zebrafish)
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
238
  • 238
99.21
  • 99.21
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.38
  • 87.38
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
5.88e3
  • 5.88e3
80.32
  • 80.32
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.89
  • 64.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.51
  • 64.51
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.86
  • 61.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.09
  • 55.09
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.15
  • 51.15
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.69
  • 46.69
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.63
  • 44.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.64
  • 40.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.89
  • 39.89
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.50
  • 35.50
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.33e4
  • 2.33e4
  • 2.88e4
21.91
  • 21.91
  • 3.49
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi20 genesCompare expression
Opisthokonta64 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000071389.

Cross-references

EnsemblENSDARG00000071389 (si:dkey-78l4.6)
ZFINZDB-GENE-060503-83 (si:dkey-78l4.6)
Uniprot/SPTREMBLF1QJ90, F1QJ90_DANRE

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