D. rerio Gene: ptprc - ENSDARG00000071437 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071437
Nameptprc
Descriptionprotein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
OrganismDanio rerio (zebrafish)
Synonym(s)cd45, si:dkeyp-47c5.1
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
278
  • 278
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
672
  • 672
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
748
  • 748
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
766
  • 766
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
928
  • 928
96.90
  • 96.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.32e3
  • 1.32e3
95.60
  • 95.60
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.81
  • 92.81
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.09e3
  • 3.09e3
  • 1.78e4
89.65
  • 89.65
  • 40.25
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.52e3
  • 3.52e3
88.22
  • 88.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.22e3
  • 4.22e3
85.86
  • 85.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.54e3
  • 4.54e3
  • 1.38e4
84.80
  • 84.80
  • 53.84
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.50
  • 81.50
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.78
  • 77.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.06
  • 76.06
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 1.07e4
  • 1.12e4
75.00
  • 75.00
  • 64.28
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.40
  • 73.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.80e3
  • 9.80e3
67.17
  • 67.17
AEIR
  • AEIR
UBERON:0018549ventral wall of dorsal aorta
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
1.12e4
  • 1.12e4
  • 1.24e4
  • 1.49e4
  • 1.49e4
62.50
  • 62.50
  • 58.33
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003061blood island
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.74
  • 55.74
AEIR
  • AEIR
CL:0000049common myeloid progenitor
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000037hematopoietic stem cell
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.66e4
  • 1.66e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.67e4
  • 1.67e4
  • 1.70e4
44.24
  • 44.24
  • 43.03
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.67e4
  • 1.67e4
  • 1.72e4
  • 1.76e4
  • 1.81e4
  • 1.91e4
43.97
  • 43.97
  • 42.49
  • 41.18
  • 39.24
  • 36.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000071437.

Cross-references

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