D. rerio Gene: si:dkey-121a11.3 - ENSDARG00000071458 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071458
Namesi:dkey-121a11.3
Descriptionsi:dkey-121a11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-417]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qdi4
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.79
  • 81.79
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.11e3
  • 7.11e3
76.20
  • 76.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.82
  • 73.82
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.22e3
  • 9.22e3
  • 1.09e4
69.15
  • 69.15
  • 63.49
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
65.95
  • 65.95
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.28e4
62.14
  • 62.14
  • 57.25
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.35e4
  • 1.35e4
  • 1.48e4
54.64
  • 54.64
  • 50.60
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.44e4
  • 1.44e4
  • 1.45e4
  • 1.55e4
  • 1.55e4
  • 1.66e4
51.71
  • 51.71
  • 51.34
  • 48.11
  • 47.97
  • 44.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.30
  • 50.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.65
  • 48.65
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.56e4
  • 1.56e4
47.83
  • 47.83
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.55
  • 47.55
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.74
  • 46.74
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.84
  • 45.84
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.66e4
  • 1.66e4
44.42
  • 44.42
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.62
  • 39.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.22
  • 34.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000071458 (si:dkey-121a11.3)
ZFINZDB-GENE-050208-417 (si:dkey-121a11.3)
EMBLBX465190
Uniprot/SPTREMBLF1R6J1, F1R6J1_DANRE

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