D. rerio Gene: zic6 - ENSDARG00000071496 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071496
Namezic6
Descriptionzic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
5.66e3
  • 5.66e3
  • 9.01e3
  • 9.35e3
  • 1.04e4
  • 1.13e4
  • 1.23e4
  • 1.26e4
  • 1.44e4
  • 1.58e4
  • 1.75e4
81.05
  • 81.05
  • 69.82
  • 68.70
  • 65.12
  • 62.02
  • 58.87
  • 57.67
  • 51.89
  • 46.94
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
  • 1.11e4
72.41
  • 72.41
  • 62.78
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
  • 2.20e4
67.44
  • 67.44
  • 26.17
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
1.09e4
  • 1.09e4
  • 1.22e4
  • 1.34e4
  • 1.37e4
  • 1.45e4
  • 1.45e4
  • 1.47e4
  • 1.47e4
  • 1.50e4
  • 1.58e4
63.66
  • 63.66
  • 59.29
  • 54.99
  • 54.05
  • 51.46
  • 51.42
  • 50.87
  • 50.85
  • 49.94
  • 47.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.30e4
62.03
  • 62.03
  • 56.49
AEIR
  • AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
1.24e4
  • 1.24e4
  • 1.37e4
58.32
  • 58.32
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.28e4
  • 1.28e4
  • 1.38e4
  • 1.39e4
57.12
  • 57.12
  • 53.83
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 1.43e4
  • 1.57e4
55.79
  • 55.79
  • 52.28
  • 47.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009614hindbrain neural plate
  • ZFS:0000023Segmentation:1-4 somites
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.40e4
  • 1.40e4
53.22
  • 53.22
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.52e4
  • 1.52e4
  • 1.69e4
  • 1.75e4
49.24
  • 49.24
  • 43.58
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.21
  • 40.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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