D. rerio Gene: mgat5 - ENSDARG00000071506 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071506
Namemgat5
Descriptionmannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-4h4.2, zgc:136939
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.83e3
  • 4.83e3
  • 1.50e4
83.82
  • 83.82
  • 49.89
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.33
  • 82.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.81
  • 79.81
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
  • 1.04e4
78.98
  • 78.98
  • 65.27
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.58
  • 78.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.49e3
  • 6.49e3
  • 8.69e3
78.26
  • 78.26
  • 70.91
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:00072334 cell stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.54e3
  • 6.54e3
  • 6.79e3
  • 1.27e4
  • 1.38e4
  • 1.40e4
  • 1.47e4
  • 1.49e4
  • 1.65e4
  • 1.70e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
78.12
  • 78.12
  • 77.27
  • 57.58
  • 53.89
  • 53.25
  • 50.68
  • 50.20
  • 44.80
  • 42.98
  • 40.56
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
6.92e3
  • 6.92e3
  • 1.19e4
  • 1.34e4
  • 1.54e4
76.82
  • 76.82
  • 59.99
  • 54.99
  • 48.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.18e3
  • 7.18e3
75.97
  • 75.97
AEIR
  • AEIR
UBERON:0001795inner plexiform layer of retina
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.46
  • 74.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
7.69e3
  • 7.69e3
  • 9.62e3
  • 9.84e3
  • 1.17e4
  • 1.31e4
  • 1.31e4
74.26
  • 74.26
  • 67.79
  • 67.06
  • 60.81
  • 56.17
  • 56.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.06
  • 73.06
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.48
  • 72.48
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
8.23e3
  • 8.23e3
  • 1.08e4
  • 1.18e4
  • 1.21e4
  • 1.24e4
  • 1.56e4
72.45
  • 72.45
  • 63.69
  • 60.38
  • 59.58
  • 58.60
  • 47.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
8.48e3
  • 8.48e3
  • 9.27e3
  • 9.30e3
  • 9.44e3
  • 9.58e3
71.61
  • 71.61
  • 68.95
  • 68.85
  • 68.39
  • 67.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.60e3
  • 8.60e3
71.22
  • 71.22
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.89e3
  • 8.89e3
  • 1.48e4
  • 1.64e4
70.24
  • 70.24
  • 50.47
  • 45.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.61e3
  • 9.61e3
67.83
  • 67.83
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.03e4
  • 1.03e4
65.62
  • 65.62
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.50e4
64.28
  • 64.28
  • 49.90
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.21
  • 61.21
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000037Larval:Day 5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.30e4
  • 1.30e4
56.63
  • 56.63
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.56
  • 55.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.50e4
55.44
  • 55.44
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0001790outer plexiform layer of retina
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007274crista of ampulla of anterior semicircular duct of membranous laybrinth
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007275crista of ampulla of posterior semicircular duct of membranous laybrinth
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007276crista of ampulla of lateral semicircular duct of membranous laybrinth
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000941cranial nerve II
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000071506.

Cross-references

EnsemblENSDARG00000071506 (mgat5)
ZFINZDB-GENE-060616-238 (mgat5)
EMBLBC117664, BX664720, CU571316, CU861502
Uniprot/SPTREMBLQ1ECU6, Q1ECU6_DANRE

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