D. rerio Gene: SHISA4 (1 to many) - ENSDARG00000071541 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071541
NameSHISA4 (1 to many)
Descriptionsi:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
OrganismDanio rerio (zebrafish)
Synonym(s)c1orf40, hshisa4, tmem58

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.99e3
  • 2.99e3
  • 3.64e3
90.00
  • 90.00
  • 87.80
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
87.08
  • 87.08
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
4.70e3
  • 4.70e3
  • 1.02e4
84.26
  • 84.26
  • 65.71
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.79
  • 82.79
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
82.41
  • 82.41
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.60e3
  • 5.60e3
81.24
  • 81.24
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.68
  • 80.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
76.89
  • 76.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.88
  • 66.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.02
  • 50.02
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.65
  • 49.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.86
  • 40.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.85
  • 38.85
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.91e4
  • 1.91e4
  • 2.02e4
  • 2.77e4
36.01
  • 36.01
  • 32.37
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.08e4
  • 2.08e4
30.26
  • 30.26
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.69
  • 29.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.23
  • 24.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000071541 (SHISA4 (1 to many))
HGNCHGNC:27139 (SHISA4 (1 to many))
ZFINZDB-GENE-050208-412 (si:dkey-42i9.8)
EMBLBX465868
Uniprot/SPTREMBLF1R3D6, F1R3D6_DANRE

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