D. rerio Gene: SHISA4 (1 to many) - ENSDARG00000071543 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071543
NameSHISA4 (1 to many)
Descriptionsi:dkey-42i9.7 [Source:ZFIN;Acc:ZDB-GENE-050208-731]
OrganismDanio rerio (zebrafish)
Synonym(s)c1orf40, hshisa4, tmem58

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.04e3
  • 2.04e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.46
  • 91.46
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.55
  • 85.55
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.76
  • 80.76
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
  • 1.49e4
76.12
  • 76.12
  • 50.25
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.18e3
  • 7.18e3
75.96
  • 75.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.79e3
  • 7.79e3
73.91
  • 73.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.39e3
  • 8.39e3
  • 1.04e4
71.92
  • 71.92
  • 65.28
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.20
  • 70.20
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.64
  • 67.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.98
  • 63.98
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.03
  • 62.03
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.62
  • 52.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.87
  • 47.87
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.17
  • 44.17
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.67e4
  • 1.67e4
44.17
  • 44.17
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.78e4
  • 1.78e4
40.33
  • 40.33
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.09e4
  • 2.09e4
  • 2.49e4
  • 2.77e4
30.15
  • 30.15
  • 16.48
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.19e4
  • 2.19e4
  • 2.25e4
26.55
  • 26.55
  • 24.66
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000071543 (SHISA4 (1 to many))
HGNCHGNC:27139 (SHISA4 (1 to many))
ZFINZDB-GENE-050208-731 (si:dkey-42i9.7)
EMBLBX465868
Uniprot/SPTREMBLF6P588, F6P588_DANRE

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