Gene: prex2 - ENSDARG00000071692 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000071692
Name	prex2
Description	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch211-278g15.1
Orthologs(s)	19 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	5.84e3 5.84e3	80.44 80.44	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	8.02e3 8.02e3 9.38e3	73.14 73.14 68.58	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	8.82e3 8.82e3	70.47 70.47	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	9.76e3 9.76e3	67.31 67.31	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.00e4 1.00e4 1.46e4	66.38 66.38 51.19	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.80 64.80	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.06e4 1.06e4	64.36 64.36	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.08e4 1.08e4	63.89 63.89	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.14e4 1.14e4	61.93 61.93	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.29e4 1.29e4	56.68 56.68	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000037Larval:Day 5	1.33e4 1.33e4 1.36e4 1.48e4 1.50e4 1.52e4	55.42 55.42 54.51 50.32 49.88 49.07	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.41e4 1.41e4	52.81 52.81	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.42e4 1.42e4	52.48 52.48	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.43e4 1.43e4	52.09 52.09	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.75 50.75	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.49e4 1.49e4	50.13 50.13	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.53e4 1.53e4 1.64e4	48.83 48.83 45.24	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.57e4 1.57e4	47.38 47.38	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.63e4 1.63e4	45.54 45.54	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.71e4 1.71e4	42.73 42.73	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.82e4 1.82e4	38.90 38.90	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	19 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	19 genes ENSG00000046889 PREX2 ENSMUSG00000048960 Prex2 ENSPTRG00000020324 PREX2 ENSGGOG00000025407 PREX2 ENSMMUG00000016023 PREX2 ENSRNOG00000005391 Prex2 ENSBTAG00000022169 PREX2 ENSSSCG00000006199 PREX2 ENSECAG00000018479 PREX2 ENSOCUG00000001781 PREX2 ENSCAFG00000007620 PREX2 ENSFCAG00000008986 PREX2 ENSCPOG00000002807 PREX2 ENSEEUG00000000449 PREX2 ENSMODG00000007595 PREX2 ENSOANG00000013504 PREX2 ENSGALG00000015564 PREX2 ENSACAG00000016229 PREX2 ENSXETG00000030673 PREX2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000071692.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Vertebrata	1 gene ENSDARG00000075793 prex1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000071692.

Cross-references

Ensembl	ENSDARG00000071692 (prex2)
ZFIN	ZDB-GENE-091113-37 (prex2)
EMBL	CR354607, CR376798
Uniprot/SPTREMBL	E7F2H9, E7F2H9_DANRE